RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 ZIM2Q9NZV7 527 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 TRAF6Q9Y4K3 522 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 MYH7P12883 1935 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 LAMB1P07942 1786 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 PITPNM2Q9BZ72 1349 aa11.81□□□□□ -0.52
MARK3-213ENST00000558611 F8W031 263 aaPredicted RBP11.8□□□□□ -0.52
MARK3-213ENST00000558611 TERTO14746 1132 aaKnown RBP11.8□□□□□ -0.52
MARK3-213ENST00000558611 CAND2O75155 1236 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 ELNP15502 786 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 CYP4F3Q08477 520 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 G3BP1Q13283 466 aaKnown RBP eCLIP11.8□□□□□ -0.52
MARK3-213ENST00000558611 PIN1Q13526 163 aaPredicted RBP11.8□□□□□ -0.52
MARK3-213ENST00000558611 HLTFQ14527 1009 aaKnown RBP eCLIP11.8□□□□□ -0.52
MARK3-213ENST00000558611 PRSS53Q2L4Q9 553 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 C20orf194Q5TEA3 1177 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 PIK3R6Q5UE93 754 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 ANGEL2Q5VTE6 544 aaKnown RBP11.8□□□□□ -0.52
MARK3-213ENST00000558611 GPAT2Q6NUI2 795 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 RSPO2Q6UXX9 243 aaPredicted RBP11.8□□□□□ -0.52
MARK3-213ENST00000558611 DDX53Q86TM3 631 aaKnown RBP11.8□□□□□ -0.52
MARK3-213ENST00000558611 PASD1Q8IV76 773 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 EXOC8Q8IYI6 725 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 CHPFQ8IZ52 775 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 TBC1D22AQ8WUA7 517 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 PMM1Q92871 262 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 ZBED3Q96IU2 234 aaPredicted RBP11.8□□□□□ -0.52
MARK3-213ENST00000558611 COX4I2Q96KJ9 171 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 ZDHHC15Q96MV8 337 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 SMAD5Q99717 465 aaKnown RBP11.8□□□□□ -0.52
MARK3-213ENST00000558611 ZFYVE21Q9BQ24 234 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 DSCC1Q9BVC3 393 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 PRDM10Q9NQV6 1147 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 FOCADQ5VW36 1801 aa11.8□□□□□ -0.52
MARK3-213ENST00000558611 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 A0A1B0GUL7 405 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 ADM5C9JUS6 153 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 F8W735 103 aaPredicted RBP11.79□□□□□ -0.52
MARK3-213ENST00000558611 WNT10BO00744 389 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 NEMP1O14524 444 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 SIGLEC6O43699 453 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 ADORA1P30542 326 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 TMPRSS15P98073 1019 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
MARK3-213ENST00000558611 SNW1Q13573 536 aaKnown RBP11.79□□□□□ -0.52
MARK3-213ENST00000558611 CST9Q5W186 159 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 LYPD4Q6UWN0 246 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 MYO1HQ8N1T3 1032 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 KREMEN2Q8NCW0 462 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 YIPF2Q9BWQ6 316 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 CDH19Q9H159 772 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
MARK3-213ENST00000558611 ZBTB40Q9NUA8 1239 aa11.79□□□□□ -0.52
MARK3-213ENST00000558611 CELF2O95319 508 aaKnown RBP11.78□□□□□ -0.52
MARK3-213ENST00000558611 RAB6AP20340 208 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 PHKA1P46020 1223 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 TIMM10P62072 90 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 OS9Q13438 667 aaPredicted RBP11.78□□□□□ -0.52
MARK3-213ENST00000558611 DLGAP5Q15398 846 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 ACBD5Q5T8D3 534 aaPredicted RBP11.78□□□□□ -0.52
MARK3-213ENST00000558611 SYDE2Q5VT97 1194 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 ZBTB46Q86UZ6 589 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 CNTD1Q8N815 330 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 TRIM8Q9BZR9 551 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 CCDC8Q9H0W5 538 aaPredicted RBP11.78□□□□□ -0.52
MARK3-213ENST00000558611 GNL3LQ9NVN8 582 aaKnown RBP11.78□□□□□ -0.52
MARK3-213ENST00000558611 SAMD15Q9P1V8 674 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 DAGLAQ9Y4D2 1042 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 PCDHA9Q9Y5H5 950 aa11.78□□□□□ -0.52
MARK3-213ENST00000558611 RASSF10A6NK89 507 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 SURF6O75683 361 aaKnown RBP11.77□□□□□ -0.53
MARK3-213ENST00000558611 PYGMP11217 842 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 PREPP48147 710 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 USP11P51784 963 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 RHBDL3P58872 404 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 POU4F1Q01851 419 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 GUCY1A3Q02108 690 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 TESK1Q15569 626 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 DENND5AQ6IQ26 1287 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 DLK2Q6UY11 383 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 EZH1Q92800 747 aaPredicted RBP11.77□□□□□ -0.53
MARK3-213ENST00000558611 COPS5Q92905 334 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 SEMA6CQ9H3T2 930 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 AASDHPPTQ9NRN7 309 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 TRHDEQ9UKU6 1024 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 ABT1Q9ULW3 272 aaKnown RBP11.77□□□□□ -0.53
MARK3-213ENST00000558611 RNF112Q9ULX5 631 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 PCDHAC2Q9Y5I4 1007 aa11.77□□□□□ -0.53
MARK3-213ENST00000558611 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
MARK3-213ENST00000558611 SCRN1Q12765 414 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 APOBEC3FQ8IUX4 373 aaKnown RBP11.76□□□□□ -0.53
MARK3-213ENST00000558611 RPAP2Q8IXW5 612 aaPredicted RBP11.76□□□□□ -0.53
MARK3-213ENST00000558611 AGGF1Q8N302 714 aaeCLIP11.76□□□□□ -0.53
MARK3-213ENST00000558611 HOOK2Q96ED9 719 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 CDCA5Q96FF9 252 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 NEUROD6Q96NK8 337 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 YIPF4Q9BSR8 244 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 PLVAPQ9BX97 442 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 CEP41Q9BYV8 373 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 GPR108Q9NPR9 543 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 CHST7Q9NS84 486 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms