RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 PGRMC1O00264 195 aaKnown RBP14.03□□□□□ -0.16
LDLR-207ENST00000558013 HOXA7P31268 230 aaPredicted RBP14.03□□□□□ -0.16
LDLR-207ENST00000558013 MAGEA9P43362 315 aa14.03□□□□□ -0.16
LDLR-207ENST00000558013 FMO5P49326 533 aa14.03□□□□□ -0.16
LDLR-207ENST00000558013 MMP14P50281 582 aa14.03□□□□□ -0.16
LDLR-207ENST00000558013 ODR4Q5SWX8 454 aa14.03□□□□□ -0.16
LDLR-207ENST00000558013 CHADLQ6NUI6 762 aa14.03□□□□□ -0.16
LDLR-207ENST00000558013 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.165e-8■□□□□ 11.1
LDLR-207ENST00000558013 PARVGQ9HBI0 331 aa14.03□□□□□ -0.16
LDLR-207ENST00000558013 OLFML3Q9NRN5 406 aa14.03□□□□□ -0.16
LDLR-207ENST00000558013 STXBP5LQ9Y2K9 1186 aa14.03□□□□□ -0.16
LDLR-207ENST00000558013 BZW2Q9Y6E2 419 aaKnown RBP14.03□□□□□ -0.16
LDLR-207ENST00000558013 NDUFAB1O14561 156 aa14.02□□□□□ -0.16
LDLR-207ENST00000558013 FGGP02679 453 aa14.02□□□□□ -0.16
LDLR-207ENST00000558013 PSMC2P35998 433 aaKnown RBP14.02□□□□□ -0.16
LDLR-207ENST00000558013 PHLDB3Q6NSJ2 640 aa14.02□□□□□ -0.16
LDLR-207ENST00000558013 MIGA2Q7L4E1 593 aa14.02□□□□□ -0.16
LDLR-207ENST00000558013 ZNF720Q7Z2F6 126 aa14.02□□□□□ -0.16
LDLR-207ENST00000558013 THAP2Q9H0W7 228 aa14.02□□□□□ -0.16
LDLR-207ENST00000558013 ISCUQ9H1K1 167 aa14.02□□□□□ -0.16
LDLR-207ENST00000558013 UNC45AQ9H3U1 944 aa14.02□□□□□ -0.16
LDLR-207ENST00000558013 QTRT2Q9H974 415 aaKnown RBP14.02□□□□□ -0.16
LDLR-207ENST00000558013 METTL14Q9HCE5 456 aaKnown RBP14.02□□□□□ -0.16
LDLR-207ENST00000558013 BCCIPQ9P287 314 aaKnown RBP eCLIP14.02□□□□□ -0.16
LDLR-207ENST00000558013 BTNL10A8MVZ5 291 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 EBAG9O00559 213 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 GAS7O60861 476 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 NR1D1P20393 614 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 STAT1P42224 750 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 STAT2P52630 851 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 SKOR1P84550 965 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 FAM178BQ8IXR5 827 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 NLGN1Q8N2Q7 840 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 SLC30A5Q8TAD4 765 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 ACTRT1Q8TDG2 376 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 SLC20A1Q8WUM9 679 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 AGPAT3Q9NRZ7 376 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 COG5Q9UP83 839 aa14.02□□□□□ -0.17
LDLR-207ENST00000558013 SHTN1A0MZ66 631 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 FOXN3O00409 490 aaPredicted RBP14.01□□□□□ -0.17
LDLR-207ENST00000558013 LSP1P33241 339 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 SOX5P35711 763 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 LLGL1Q15334 1064 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 SLFN11Q7Z7L1 901 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 ERVK-5Q9HDB9 667 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 TMOD4Q9NZQ9 345 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 FBXL5Q9UKA1 691 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 C10orf71Q711Q0 1435 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 NRXN2Q9P2S2 1712 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 SLC16A3O15427 465 aaKnown RBP14.01□□□□□ -0.17
LDLR-207ENST00000558013 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
LDLR-207ENST00000558013 ZNF746Q6NUN9 644 aaPredicted RBP14.01□□□□□ -0.17
LDLR-207ENST00000558013 DAW1Q8N136 415 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 MICALL1Q8N3F8 863 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 GLG1Q92896 1179 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 ATP6V1G3Q96LB4 118 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.01□□□□□ -0.17
LDLR-207ENST00000558013 ZBTB21Q9ULJ3 1066 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 QSER1Q2KHR3 1735 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 H0YGN5 161 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 CYP3A4P08684 503 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 PDE6BP35913 854 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 HSPA9P38646 679 aaKnown RBP14.01□□□□□ -0.17
LDLR-207ENST00000558013 C10orf76Q5T2E6 689 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 CPNE8Q86YQ8 564 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 MREGQ8N565 214 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 WHAMMQ8TF30 809 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 UBLCP1Q8WVY7 318 aaPredicted RBP14.01□□□□□ -0.17
LDLR-207ENST00000558013 KAT5Q92993 513 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 PBKQ96KB5 322 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 TSPYL1Q9H0U9 437 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 NFS1Q9Y697 457 aa14.01□□□□□ -0.17
LDLR-207ENST00000558013 YDJCA8MPS7 323 aa14□□□□□ -0.17
LDLR-207ENST00000558013 TMOD1P28289 359 aa14□□□□□ -0.17
LDLR-207ENST00000558013 UBAP2Q5T6F2 1119 aaKnown RBP14□□□□□ -0.17
LDLR-207ENST00000558013 BTNL9Q6UXG8 535 aa14□□□□□ -0.17
LDLR-207ENST00000558013 ALG3Q92685 438 aa14□□□□□ -0.17
LDLR-207ENST00000558013 HES6Q96HZ4 224 aa14□□□□□ -0.17
LDLR-207ENST00000558013 LXNQ9BS40 222 aa14□□□□□ -0.17
LDLR-207ENST00000558013 ZNF577Q9BSK1 485 aa14□□□□□ -0.17
LDLR-207ENST00000558013 INTS2Q9H0H0 1204 aaKnown RBP14□□□□□ -0.17
LDLR-207ENST00000558013 EXOC3O60645 756 aa14□□□□□ -0.17
LDLR-207ENST00000558013 CTNNA1P35221 906 aaKnown RBP14□□□□□ -0.17
LDLR-207ENST00000558013 MARCKSL1P49006 195 aa14□□□□□ -0.17
LDLR-207ENST00000558013 SLC20A2Q08357 652 aa14□□□□□ -0.17
LDLR-207ENST00000558013 ZNF844Q08AG5 666 aa14□□□□□ -0.17
LDLR-207ENST00000558013 ITGB3BPQ13352 177 aaPredicted RBP14□□□□□ -0.17
LDLR-207ENST00000558013 DGKZQ13574 1117 aa14□□□□□ -0.17
LDLR-207ENST00000558013 VPS36Q86VN1 386 aa14□□□□□ -0.17
LDLR-207ENST00000558013 KAT2BQ92831 832 aa14□□□□□ -0.17
LDLR-207ENST00000558013 PPANQ9NQ55 473 aaKnown RBP14□□□□□ -0.17
LDLR-207ENST00000558013 TRPC5Q9UL62 973 aaPredicted RBP14□□□□□ -0.17
LDLR-207ENST00000558013 MYO1FO00160 1098 aa13.99□□□□□ -0.17
LDLR-207ENST00000558013 HIP1RO75146 1068 aa13.99□□□□□ -0.17
LDLR-207ENST00000558013 CEP55Q53EZ4 464 aa13.99□□□□□ -0.17
LDLR-207ENST00000558013 KDM7AQ6ZMT4 941 aa13.99□□□□□ -0.17
LDLR-207ENST00000558013 KRT27Q7Z3Y8 459 aa13.99□□□□□ -0.17
LDLR-207ENST00000558013 SYCP3Q8IZU3 236 aa13.99□□□□□ -0.17
LDLR-207ENST00000558013 STK33Q9BYT3 514 aa13.99□□□□□ -0.17
LDLR-207ENST00000558013 GCOM1H8Y6P7 765 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms