RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 GCOM2Q9BZD3 368 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-234ENST00000557703 LRRC27Q9C0I9 530 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 ADAMTS10Q9H324 1103 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 COL4A3BPQ9Y5P4 624 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 PP2D1A8MPX8 630 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 ZBTB39O15060 712 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 NBNO60934 754 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 GUCY2CP25092 1073 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 ABCD1P33897 745 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 ARL2P36404 184 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 CLCN3P51790 818 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 NLRP11P59045 1033 aaKnown RBP15.2■□□□□ 0.02
SHMT2-234ENST00000557703 AXDND1Q5T1B0 1012 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-234ENST00000557703 RASIP1Q5U651 963 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 CHRDL2Q6WN34 429 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 IFNLR1Q8IU57 520 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-234ENST00000557703 LRRC71Q8N4P6 559 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 SYMPKQ92797 1274 aaKnown RBP15.2■□□□□ 0.02
SHMT2-234ENST00000557703 DRC1Q96MC2 740 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 IFIH1Q9BYX4 1025 aaKnown RBP15.2■□□□□ 0.02
SHMT2-234ENST00000557703 MAGEF1Q9HAY2 307 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 FAM13BQ9NYF5 915 aa15.2■□□□□ 0.02
SHMT2-234ENST00000557703 TRIOBPQ9H2D6 2365 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 TMEM150BA6NC51 233 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 RPS6KA5O75582 802 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 CTSHP09668 335 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 DARSP14868 501 aaKnown RBP15.19■□□□□ 0.02
SHMT2-234ENST00000557703 NCLP19338 710 aaKnown RBP15.19■□□□□ 0.02
SHMT2-234ENST00000557703 CMA1P23946 247 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 SLC12A3P55017 1021 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 MKRN4PQ13434 485 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-234ENST00000557703 MBTPS1Q14703 1052 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 GPNMBQ14956 572 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 LRIT3Q3SXY7 679 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 RRAGBQ5VZM2 374 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 ZNF365Q70YC5 407 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 C16orf59Q7L2K0 433 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 IQUBQ8NA54 791 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 LEO1Q8WVC0 666 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-234ENST00000557703 PRPF31Q8WWY3 499 aaKnown RBP15.19■□□□□ 0.02
SHMT2-234ENST00000557703 LARP4BQ92615 738 aaKnown RBP15.19■□□□□ 0.02
SHMT2-234ENST00000557703 EPSTI1Q96J88 318 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 CLIC6Q96NY7 704 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 PNMA5Q96PV4 448 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.19■□□□□ 0.023e-9■□□□□ 10
SHMT2-234ENST00000557703 XPNPEP1Q9NQW7 623 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 CHST12Q9NRB3 414 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 BMP2KQ9NSY1 1161 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-234ENST00000557703 USP25Q9UHP3 1055 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 ODF2LQ9ULJ1 636 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 PCDHA7Q9UN72 937 aa15.19■□□□□ 0.02
SHMT2-234ENST00000557703 A0A1W2PQ27 194 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 A0A1W2PQ64 194 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 A0A1W2PQD8 194 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 USO1O60763 962 aaKnown RBP15.18■□□□□ 0.02
SHMT2-234ENST00000557703 VTNP04004 478 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 PLA2G4BP0C869 781 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 PLCG1P19174 1290 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 SFPQP23246 707 aaKnown RBP eCLIP15.18■□□□□ 0.02
SHMT2-234ENST00000557703 PHKA2P46019 1235 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 AMPD3Q01432 767 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 GRIN1Q05586 938 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 NCBP1Q09161 790 aaKnown RBP15.18■□□□□ 0.02
SHMT2-234ENST00000557703 LAMTOR4Q0VGL1 99 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 PAK2Q13177 524 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 LPIN1Q14693 890 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 KIZQ2M2Z5 673 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 RINT1Q6NUQ1 792 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 C1orf186Q6ZWK4 172 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 DEFB128Q7Z7B8 93 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 RHPN2Q8IUC4 686 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 SLC17A8Q8NDX2 589 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 TET1Q8NFU7 2136 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 NLRP7Q8WX94 980 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 RSPH1Q8WYR4 309 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 RAD54LQ92698 747 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 KCNN1Q92952 543 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 VWCEQ96DN2 955 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 IFT74Q96LB3 600 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 SCLT1Q96NL6 688 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 C2orf40Q9H1Z8 148 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 TSHZ2Q9NRE2 1034 aa15.18■□□□□ 0.02
SHMT2-234ENST00000557703 E9PMD0 336 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 H0YCG3 227 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 AXLP30530 894 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 NAMPTP43490 491 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 EFNA5P52803 228 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 PTENP60484 403 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 KARSQ15046 597 aaKnown RBP15.17■□□□□ 0.02
SHMT2-234ENST00000557703 ZRSR1Q15695 479 aaKnown RBP15.17■□□□□ 0.02
SHMT2-234ENST00000557703 RESP18Q5W5W9 173 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 SV2BQ7L1I2 683 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 DBF4BQ8NFT6 615 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 TMEM143Q96AN5 459 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 CCDC34Q96HJ3 373 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 RNPC3Q96LT9 517 aaKnown RBP15.17■□□□□ 0.02
SHMT2-234ENST00000557703 SLC9A7Q96T83 725 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 SH2D3AQ9BRG2 576 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 NTPCRQ9BSD7 190 aaKnown RBP15.17■□□□□ 0.02
SHMT2-234ENST00000557703 TRAIPQ9BWF2 469 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms