RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 MECP2P51608 486 aaKnown RBP4.03□□□□□ -1.76
FOXN3-216ENST00000557496 ACAP1Q15027 740 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 Q6ZPA2 131 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 Q6ZRM9 215 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 MRGPRGQ86SM5 289 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 OR5AN1Q8NGI8 311 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 NKD2Q969F2 451 aaPredicted RBP4.03□□□□□ -1.76
FOXN3-216ENST00000557496 GFM2Q969S9 779 aaKnown RBP4.03□□□□□ -1.76
FOXN3-216ENST00000557496 MIEF2Q96C03 454 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 ARMC5Q96C12 935 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 GPHA2Q96T91 129 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 AGAP2Q99490 1192 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 BOCQ9BWV1 1114 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 TRIM39Q9HCM9 518 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 SLC2A4RGQ9NR83 387 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 SAE1Q9UBE0 346 aaPredicted RBP4.03□□□□□ -1.76
FOXN3-216ENST00000557496 DENND2AQ9ULE3 1009 aa4.03□□□□□ -1.76
FOXN3-216ENST00000557496 REXO2Q9Y3B8 237 aaKnown RBP4.03□□□□□ -1.76
FOXN3-216ENST00000557496 CCDC163A0A0D9SF12 145 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 C2orf78A6NCI8 922 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 KRT4P19013 534 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 GTF2F1P35269 517 aaKnown RBP eCLIP4.02□□□□□ -1.77
FOXN3-216ENST00000557496 SCNN1GP51170 649 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 ANTXR2P58335 489 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 NANOS3P60323 173 aaKnown RBP4.02□□□□□ -1.77
FOXN3-216ENST00000557496 SLC25A3Q00325 362 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 ZNF575Q86XF7 245 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 ULK2Q8IYT8 1036 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 ANKRD53Q8N9V6 530 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 ZSWIM2Q8NEG5 633 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 THAP3Q8WTV1 239 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-216ENST00000557496 E2F7Q96AV8 911 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 DNAJC7Q99615 494 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 PRRX2Q99811 253 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 NCOA5Q9HCD5 579 aaKnown RBP4.02□□□□□ -1.77
FOXN3-216ENST00000557496 MAGEL2Q9UJ55 1249 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 DMRT1Q9Y5R6 373 aa4.02□□□□□ -1.77
FOXN3-216ENST00000557496 RBM8AQ9Y5S9 174 aaKnown RBP4.02□□□□□ -1.77
FOXN3-216ENST00000557496 DVL2O14641 736 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 TGM1P22735 817 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 MAN2A2P49641 1150 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 BPIFB4P59827 614 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 SLC6A3Q01959 620 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 ROM1Q03395 351 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 RBL2Q08999 1139 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 TCIRG1Q13488 830 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 TOB2Q14106 344 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-216ENST00000557496 DGKDQ16760 1214 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 ARHGAP44Q17R89 818 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 GAGE13Q4V321 117 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 C2orf27AQ580R0 203 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 GAREM2Q75VX8 874 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 GCDHQ92947 438 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-216ENST00000557496 RPL10LQ96L21 214 aaKnown RBP4.01□□□□□ -1.77
FOXN3-216ENST00000557496 HAPLN2Q9GZV7 340 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 GPRC5BQ9NZH0 403 aa4.01□□□□□ -1.77
FOXN3-216ENST00000557496 UBA6A0AVT1 1052 aaPredicted RBP4□□□□□ -1.77
FOXN3-216ENST00000557496 M0R2C6 588 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 GLRX3O76003 335 aaKnown RBP4□□□□□ -1.77
FOXN3-216ENST00000557496 KRT37O76014 449 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 KIF11P52732 1056 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 COL10A1Q03692 680 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 CNGB1Q14028 1251 aaPredicted RBP4□□□□□ -1.77
FOXN3-216ENST00000557496 ELAVL1Q15717 326 aaKnown RBP4□□□□□ -1.77
FOXN3-216ENST00000557496 SLFN12LQ6IEE8 588 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 ZCCHC8Q6NZY4 707 aaKnown RBP4□□□□□ -1.77
FOXN3-216ENST00000557496 FAM111BQ6SJ93 734 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 ZNF662Q6ZS27 426 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 HTR3DQ70Z44 454 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 CLEC14AQ86T13 490 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 MKL1Q969V6 931 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 MAML3Q96JK9 1138 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 C8orf37Q96NL8 207 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 SRPK1Q96SB4 655 aaKnown RBP4□□□□□ -1.77
FOXN3-216ENST00000557496 IL23AQ9NPF7 189 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 POLR3BQ9NW08 1133 aaPredicted RBP4□□□□□ -1.77
FOXN3-216ENST00000557496 KCMF1Q9P0J7 381 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 PTCH2Q9Y6C5 1203 aa4□□□□□ -1.77
FOXN3-216ENST00000557496 UBE2QL1A1L167 161 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 KLRG2A4D1S0 409 aaPredicted RBP3.99□□□□□ -1.77
FOXN3-216ENST00000557496 TRAF5O00463 557 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 RAMP2O60895 175 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 VSIG10L2P0DP72 767 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 RABGGTBP53611 331 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 BMP8AQ7Z5Y6 402 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 RPUSD2Q8IZ73 545 aaKnown RBP3.99□□□□□ -1.77
FOXN3-216ENST00000557496 CHST14Q8NCH0 376 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 DYDC2Q96IM9 177 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 C16orf92Q96LL3 132 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 TCF25Q9BQ70 676 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 GPR87Q9BY21 358 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 ACSS2Q9NR19 701 aa3.99□□□□□ -1.77
FOXN3-216ENST00000557496 E9PSI1 815 aa3.98□□□□□ -1.77
FOXN3-216ENST00000557496 PLD2O14939 933 aa3.98□□□□□ -1.77
FOXN3-216ENST00000557496 FOXN1O15353 648 aa3.98□□□□□ -1.77
FOXN3-216ENST00000557496 TOX4O94842 621 aa3.98□□□□□ -1.77
FOXN3-216ENST00000557496 PTGS2P35354 604 aa3.98□□□□□ -1.77
FOXN3-216ENST00000557496 IGFALSP35858 605 aa3.98□□□□□ -1.77
FOXN3-216ENST00000557496 SMAD3P84022 425 aaKnown RBP3.98□□□□□ -1.77
FOXN3-216ENST00000557496 MYBPC3Q14896 1274 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms