RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CMTR2Q8IYT2 770 aaKnown RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 ZNF511Q8NB15 262 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 VN1R2Q8NFZ6 395 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 POF1BQ8WVV4 589 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 DNAJB3Q8WWF6 145 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 TSC1Q92574 1164 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 ZBTB10Q96DT7 871 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 RPGRIP1Q96KN7 1286 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 SENP7Q9BQF6 1050 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 PHF7Q9BWX1 381 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 KRT23Q9C075 422 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 FAM49AQ9H0Q0 323 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 RIOX1Q9H6W3 641 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 CNNM2Q9H8M5 875 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 TUBE1Q9UJT0 475 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 MAFBQ9Y5Q3 323 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 PTPRZ1P23471 2315 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-207ENST00000557470 KIAA1671Q9BY89 1806 aa6.73□□□□□ -1.33
VPS33B-207ENST00000557470 BAZ2BQ9UIF8 2168 aaKnown RBP6.72□□□□□ -1.33
VPS33B-207ENST00000557470 PNMA6FA0A0J9YX94 578 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 SOWAHDA6NJG2 315 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 PER2O15055 1255 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 MARCH6O60337 910 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 ATP9AO75110 1047 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 PPFIA3O75145 1194 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 F12P00748 615 aaPredicted RBP6.72□□□□□ -1.33
VPS33B-207ENST00000557470 PDGFBP01127 241 aaPredicted RBP6.72□□□□□ -1.33
VPS33B-207ENST00000557470 SCG2P13521 617 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 AVPR2P30518 371 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 IGBP1P78318 339 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 TRAF1Q13077 416 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 PCNX4Q63HM2 1172 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 DIEXFQ68CQ4 756 aaKnown RBP6.72□□□□□ -1.33
VPS33B-207ENST00000557470 USP17L6PQ6QN14 398 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 ATP8B4Q8TF62 1192 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 PIBF1Q8WXW3 757 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 SUSD6Q92537 303 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 ATOH1Q92858 354 aaPredicted RBP6.72□□□□□ -1.33
VPS33B-207ENST00000557470 ANP32EQ9BTT0 268 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 DSCC1Q9BVC3 393 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 LNPKQ9C0E8 428 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 TLE6Q9H808 572 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 SENP2Q9HC62 589 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 ATP13A2Q9NQ11 1180 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 DIAPH3Q9NSV4 1193 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 ERAP1Q9NZ08 941 aa6.72□□□□□ -1.33
VPS33B-207ENST00000557470 CACNA1AO00555 2505 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 GSTTP1A0A1W2PQM5 241 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 ANKRD33BA6NCL7 494 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 H0Y858 1186 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 MEIS2O14770 477 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 STAG3L1P0CL83 205 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 KCNA2P16389 499 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 ATF7P17544 494 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-207ENST00000557470 ITGB5P18084 799 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 IBSPP21815 317 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-207ENST00000557470 SP100P23497 879 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-207ENST00000557470 TMEM62Q0P6H9 643 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 TROAPQ12815 778 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 PAK2Q13177 524 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 HDAC1Q13547 482 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-207ENST00000557470 ELOAQ14241 798 aaKnown RBP6.71□□□□□ -1.34
VPS33B-207ENST00000557470 PTPN21Q16825 1174 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 DUSP6Q16828 381 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 PHLDB3Q6NSJ2 640 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 XRRA1Q6P2D8 792 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 NLRX1Q86UT6 975 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 PLEKHM2Q8IWE5 1019 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 GIMAP8Q8ND71 665 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-207ENST00000557470 SMARCC2Q8TAQ2 1214 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 MICAL1Q8TDZ2 1067 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 SEPT1Q8WYJ6 367 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 GLG1Q92896 1179 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 UCN2Q96RP3 112 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 FTHL17Q9BXU8 183 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 IL25Q9H293 177 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 TMX1Q9H3N1 280 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 TLR9Q9NR96 1032 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 PADI3Q9ULW8 664 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 TRPV2Q9Y5S1 764 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 GVINP1Q7Z2Y8 2422 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 IGSF9BQ9UPX0 1349 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 FAM186AA6NE01 2351 aa6.71□□□□□ -1.34
VPS33B-207ENST00000557470 PLXNA3P51805 1871 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 PLXNA4Q9HCM2 1894 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 DCHS1Q96JQ0 3298 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 M0QZ92 97 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 PIK3CDO00329 1044 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 IFIT3O14879 490 aaKnown RBP6.7□□□□□ -1.34
VPS33B-207ENST00000557470 FSCN2O14926 492 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 MGEA5O60502 916 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 FGF18O76093 207 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 INSRRP14616 1297 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 SNRPBP14678 240 aaKnown RBP6.7□□□□□ -1.34
VPS33B-207ENST00000557470 SOX11P35716 441 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 FOXK2Q01167 660 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 UBE3AQ05086 875 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 TMEM266Q2M3C6 531 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 IER5Q5VY09 327 aa6.7□□□□□ -1.34
VPS33B-207ENST00000557470 SYCE2Q6PIF2 218 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms