RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CCDC47Q96A33 483 aaKnown RBP8.47□□□□□ -1.05
TDP1-214ENST00000556063 IFT74Q96LB3 600 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 CEP89Q96ST8 783 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 LBHD1Q9BQE6 289 aaPredicted RBP8.47□□□□□ -1.05
TDP1-214ENST00000556063 INO80BQ9C086 356 aaPredicted RBP8.47□□□□□ -1.05
TDP1-214ENST00000556063 C17orf75Q9HAS0 396 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 BLOC1S4Q9NUP1 217 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 SUCLA2Q9P2R7 463 aaPredicted RBP8.47□□□□□ -1.05
TDP1-214ENST00000556063 TBX21Q9UL17 535 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 ODF2LQ9ULJ1 636 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 HPSEQ9Y251 543 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 MYH11P35749 1972 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 ARID2Q68CP9 1835 aa8.47□□□□□ -1.05
TDP1-214ENST00000556063 RSPH10B2B2RC85 870 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 H0YCG3 227 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 FAM13AO94988 1023 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 ZNF202O95125 648 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 TIMP1P01033 207 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 MYL1P05976 194 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 RSPH10BP0C881 870 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 CKBP12277 381 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 SCP2P22307 547 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 RFC2P35250 354 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 CLCN3P51790 818 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 SMTNP53814 917 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 DMP1Q13316 513 aaPredicted RBP8.46□□□□□ -1.06
TDP1-214ENST00000556063 HIC1Q14526 733 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 E2F4Q16254 413 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 NAALADL2Q58DX5 795 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 RUFY4Q6ZNE9 571 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 KRBA2Q6ZNG9 492 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 C1orf186Q6ZWK4 172 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 LRRC8DQ7L1W4 858 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 MAEAQ7L5Y9 396 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 ZNF410Q86VK4 478 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 RHPN2Q8IUC4 686 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 TMEM199Q8N511 208 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 USP38Q8NB14 1042 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 SLC17A8Q8NDX2 589 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 TMEM143Q96AN5 459 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 TIGD1Q96MW7 591 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 NOC4LQ9BVI4 516 aaKnown RBP8.46□□□□□ -1.06
TDP1-214ENST00000556063 RUSC1Q9BVN2 902 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 CELF4Q9BZC1 486 aaKnown RBP8.46□□□□□ -1.06
TDP1-214ENST00000556063 GCOM2Q9BZD3 368 aaPredicted RBP8.46□□□□□ -1.06
TDP1-214ENST00000556063 PPP1R12CQ9BZL4 782 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 POLR3FQ9H1D9 316 aaPredicted RBP8.46□□□□□ -1.06
TDP1-214ENST00000556063 XPNPEP1Q9NQW7 623 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 PDLIM7Q9NR12 457 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 KBTBD4Q9NVX7 518 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 LARSQ9P2J5 1176 aaKnown RBP8.46□□□□□ -1.06
TDP1-214ENST00000556063 SERTAD1Q9UHV2 236 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 GINS2Q9Y248 185 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 COL4A3BPQ9Y5P4 624 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 TRPV2Q9Y5S1 764 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 SQORQ9Y6N5 450 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 PHLPP2Q6ZVD8 1323 aa8.46□□□□□ -1.06
TDP1-214ENST00000556063 A0A087X0B3 334 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 HIP1RO75146 1068 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 GADD45BO75293 160 aaPredicted RBP8.45□□□□□ -1.06
TDP1-214ENST00000556063 MBD3O95983 291 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 VTNP04004 478 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 IQCF3P0C7M6 154 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 IDEP14735 1019 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 GAP43P17677 238 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 ABCD1P33897 745 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 ARL2P36404 184 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 NAMPTP43490 491 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 PHKA2P46019 1235 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 CRYBB1P53674 252 aaPredicted RBP8.45□□□□□ -1.06
TDP1-214ENST00000556063 NLRP11P59045 1033 aaKnown RBP8.45□□□□□ -1.06
TDP1-214ENST00000556063 POU5F1BQ06416 359 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 NCBP1Q09161 790 aaKnown RBP8.45□□□□□ -1.06
TDP1-214ENST00000556063 LAMTOR4Q0VGL1 99 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 TRIM71Q2Q1W2 868 aaKnown RBP8.45□□□□□ -1.06
TDP1-214ENST00000556063 LONRF3Q496Y0 759 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 FAM26DQ5JW98 314 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 ZBTB8OSQ8IWT0 167 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 CCDC65Q8IXS2 484 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 RPUSD2Q8IZ73 545 aaKnown RBP8.45□□□□□ -1.06
TDP1-214ENST00000556063 FMR1NBQ8N0W7 255 aaPredicted RBP8.45□□□□□ -1.06
TDP1-214ENST00000556063 LINC01465Q8N7H1 131 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 DEPTORQ8TB45 409 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 PRPF31Q8WWY3 499 aaKnown RBP8.45□□□□□ -1.06
TDP1-214ENST00000556063 NLRP7Q8WX94 980 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 DHX38Q92620 1227 aaKnown RBP8.45□□□□□ -1.06
TDP1-214ENST00000556063 DDX12PQ92771 950 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 NLRP4Q96MN2 994 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 CTAGE1Q96RT6 745 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 C2orf40Q9H1Z8 148 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 GOLPH3LQ9H4A5 285 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 ZHX3Q9H4I2 956 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 PARVGQ9HBI0 331 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 SEL1LQ9UBV2 794 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 CDY2AQ9Y6F7 541 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 HTTP42858 3142 aa8.45□□□□□ -1.06
TDP1-214ENST00000556063 ALPK3Q96L96 1907 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 PVALEFA0A1B0GWK0 134 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 MYMKA6NI61 221 aa8.44□□□□□ -1.06
TDP1-214ENST00000556063 LRRIQ4A6NIV6 560 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms