RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 GALCP54803 685 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 HADHBP55084 474 aaKnown RBP17.58■□□□□ 0.41
TUBB3-209ENST00000555609 RNASE9P60153 205 aaKnown RBP17.58■□□□□ 0.41
TUBB3-209ENST00000555609 PTGISQ16647 500 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 DAAM2Q86T65 1068 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 NLGN1Q8N2Q7 840 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 MYCT1Q8N699 235 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 BBXQ8WY36 941 aaPredicted RBP17.58■□□□□ 0.41
TUBB3-209ENST00000555609 SLC5A5Q92911 643 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 NACC1Q96RE7 527 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 RAB17Q9H0T7 212 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 UTP11Q9Y3A2 253 aaKnown RBP17.58■□□□□ 0.41
TUBB3-209ENST00000555609 NFS1Q9Y697 457 aa17.58■□□□□ 0.41
TUBB3-209ENST00000555609 PSMD10O75832 226 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 KIAA0754O94854 1291 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 ERLIN2O94905 339 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 SLITRK3O94933 977 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 INPP5BP32019 993 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 EIF3BP55884 814 aaKnown RBP17.58■□□□□ 0.4
TUBB3-209ENST00000555609 PPATQ06203 517 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 IKQ13123 557 aaPredicted RBP17.58■□□□□ 0.4
TUBB3-209ENST00000555609 RBM26Q5T8P6 1007 aaKnown RBP17.58■□□□□ 0.4
TUBB3-209ENST00000555609 KCTD16Q68DU8 428 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 ZNF720Q7Z2F6 126 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 SH2D3CQ8N5H7 860 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 CTNNBL1Q8WYA6 563 aaPredicted RBP17.58■□□□□ 0.4
TUBB3-209ENST00000555609 MASTLQ96GX5 879 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 SYT11Q9BT88 431 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 WDR11Q9BZH6 1224 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 CARD9Q9H257 536 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 FRMPD4Q14CM0 1322 aa17.58■□□□□ 0.4
TUBB3-209ENST00000555609 ZMYM2Q9UBW7 1377 aa17.57■□□□□ 0.4
TUBB3-209ENST00000555609 FAM187AA6NFU0 413 aa17.57■□□□□ 0.4
TUBB3-209ENST00000555609 EML1O00423 815 aa17.57■□□□□ 0.4
TUBB3-209ENST00000555609 CLIC2O15247 247 aa17.57■□□□□ 0.4
TUBB3-209ENST00000555609 HSPA6P17066 643 aa17.57■□□□□ 0.4
TUBB3-209ENST00000555609 PRELPP51888 382 aa17.57■□□□□ 0.4
TUBB3-209ENST00000555609 SH3BP5LQ7L8J4 393 aa17.57■□□□□ 0.4
TUBB3-209ENST00000555609 NEK9Q8TD19 979 aa17.57■□□□□ 0.4
TUBB3-209ENST00000555609 ZFP91Q96JP5 570 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-209ENST00000555609 DNAJC12Q9UKB3 198 aa17.57■□□□□ 0.4
TUBB3-209ENST00000555609 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
TUBB3-209ENST00000555609 OPLAHO14841 1288 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 P4HA2O15460 535 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 MAPTP10636 758 aaKnown RBP17.56■□□□□ 0.4
TUBB3-209ENST00000555609 GBP1P32455 592 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 CTNNA1P35221 906 aaKnown RBP17.56■□□□□ 0.4
TUBB3-209ENST00000555609 ATP1A2P50993 1020 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 CYP4A11Q02928 519 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 ALCAMQ13740 583 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 USH1GQ495M9 461 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 LRCH2Q5VUJ6 765 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 PACS2Q86VP3 889 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 LNX1Q8TBB1 728 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-209ENST00000555609 UIMC1Q96RL1 719 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.56■□□□□ 0.44e-7■■■□□ 18.7
TUBB3-209ENST00000555609 GOLGA6L10A0A0M3HER8 536 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 ANKRD62A6NC57 917 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 MEFVO15553 781 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-209ENST00000555609 FAM107AO95990 144 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 GUCY2CP25092 1073 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 DRG2P55039 364 aaKnown RBP17.56■□□□□ 0.4
TUBB3-209ENST00000555609 POU5F1Q01860 360 aaKnown RBP17.56■□□□□ 0.4
TUBB3-209ENST00000555609 TCP10Q12799 353 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 DRP2Q13474 957 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 KIF22Q14807 665 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 DRAP1Q14919 205 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-209ENST00000555609 R3HDM1Q15032 1099 aaKnown RBP17.56■□□□□ 0.4
TUBB3-209ENST00000555609 SUGP1Q8IWZ8 645 aaKnown RBP17.56■□□□□ 0.4
TUBB3-209ENST00000555609 RHOT2Q8IXI1 618 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 MICALL1Q8N3F8 863 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 RGL1Q9NZL6 768 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 APEX2Q9UBZ4 518 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 AJAP1Q9UKB5 411 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-209ENST00000555609 PRR12Q9ULL5 1215 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 PFASO15067 1338 aa17.56■□□□□ 0.4
TUBB3-209ENST00000555609 ANKRD31Q8N7Z5 1873 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 POLR2MP0CAP2 368 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 TNFAIP3P21580 790 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 USP8P40818 1118 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 PTENP60484 403 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 SETQ01105 290 aaPredicted RBP17.55■□□□□ 0.4
TUBB3-209ENST00000555609 PDE4CQ08493 712 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 DHX34Q14147 1143 aaKnown RBP17.55■□□□□ 0.4
TUBB3-209ENST00000555609 PLS1Q14651 629 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 TRADDQ15628 312 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 UAP1Q16222 522 aaPredicted RBP17.55■□□□□ 0.4
TUBB3-209ENST00000555609 DACT2Q5SW24 774 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 ARMC9Q7Z3E5 817 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 NLRP14Q86W24 1093 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 FAM178BQ8IXR5 827 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 OLIG1Q8TAK6 271 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 SLC35G2Q8TBE7 412 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 MORC4Q8TE76 937 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 ZNF473Q8WTR7 871 aaKnown RBP17.55■□□□□ 0.4
TUBB3-209ENST00000555609 DYDC2Q96IM9 177 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 AP1M1Q9BXS5 423 aa17.55■□□□□ 0.4
TUBB3-209ENST00000555609 INTS2Q9H0H0 1204 aaKnown RBP17.55■□□□□ 0.4
TUBB3-209ENST00000555609 MIF4GDA9UHW6 222 aaKnown RBP17.54■□□□□ 0.4
TUBB3-209ENST00000555609 DDX3YO15523 660 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms