RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 MEIS1O00470 390 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 PER2O15055 1255 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 CCNE2O96020 404 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 CLK2P49760 499 aaKnown RBP15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 NR5A1Q13285 461 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 EARS2Q5JPH6 523 aaKnown RBP15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 ODR4Q5SWX8 454 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 GALNT17Q6IS24 598 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 PDXDC2PQ6P474 469 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 ABHD15Q6UXT9 468 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 CCDC60Q8IWA6 550 aaPredicted RBP15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 BLIDQ8IZY5 108 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 ATP8B4Q8TF62 1192 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 TMEM40Q8WWA1 233 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 RPGRIP1Q96KN7 1286 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 ZNF302Q9NR11 478 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 TLR9Q9NR96 1032 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 AAASQ9NRG9 546 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 RGS18Q9NS28 235 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 HCSTQ9UBK5 93 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 ST3GAL5Q9UNP4 418 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 LOXHD1Q8IVV2 1947 aa15.78■□□□□ 0.12
SPTLC2-202ENST00000554365 IGKV6D-21A0A0A0MT36 114 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 TMEM221A6NGB7 291 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 LOC730098B7Z3J9 87 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 M0R296 226 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 GPR182O15218 404 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 FGF18O76093 207 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 KRT2P35908 639 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 SREBF1P36956 1147 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 RBM10P98175 930 aaKnown RBP15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 UBE3AQ05086 875 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 AP3B2Q13367 1082 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 KIZQ2M2Z5 673 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 FAM102BQ5T8I3 360 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 SWSAP1Q6NVH7 229 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 MIS18BP1Q6P0N0 1132 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 TRIM67Q6ZTA4 783 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 SLC24A5Q71RS6 500 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 TRMT1LQ7Z2T5 733 aaKnown RBP15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 PLA2G4DQ86XP0 818 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 CKAP2LQ8IYA6 745 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 THNSL1Q8IYQ7 743 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 KIAA0319LQ8IZA0 1049 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 RASGRP4Q8TDF6 673 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 PBXIP1Q96AQ6 731 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 FOXP1Q9H334 677 aaPredicted RBP15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 C6orf50Q9HD87 102 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 C1orf112Q9NSG2 853 aa15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
SPTLC2-202ENST00000554365 PLXNA4Q9HCM2 1894 aa15.77■□□□□ 0.11
SPTLC2-202ENST00000554365 COL1A2P08123 1366 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 TCHHQ07283 1943 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 FAM205CA6NFA0 338 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 FGFR1P11362 822 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 GNA11P29992 359 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 ERVFC1P60507 584 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 ZNF484Q5JVG2 852 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 JAKMIP3Q5VZ66 844 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 MCTP1Q6DN14 999 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 TEX2Q8IWB9 1127 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 COLGALT1Q8NBJ5 622 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 CHAMP1Q96JM3 812 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 OSMRQ99650 979 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 PHF7Q9BWX1 381 aaPredicted RBP15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 ATP6V0A4Q9HBG4 840 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 TYW1Q9NV66 732 aaKnown RBP15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 PIEZO1Q92508 2521 aa15.76■□□□□ 0.11
SPTLC2-202ENST00000554365 C9IYK1 514 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 FAM86B1E9PN63 330 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 VTNP04004 478 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 FAM86B2P0C5J1 330 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 CRYBB1P53674 252 aaPredicted RBP15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 ZXDAP98168 799 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 SAFBQ15424 915 aaKnown RBP eCLIP15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 DUSP6Q16828 381 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 FAM173BQ6P4H8 233 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 NIPA1Q7RTP0 329 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 BMP8AQ7Z5Y6 402 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 FAM228AQ86W67 206 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 NOSTRINQ8IVI9 506 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 SUGP1Q8IWZ8 645 aaKnown RBP15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 METTL13Q8N6R0 699 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 GLT8D2Q9H1C3 349 aa15.75■□□□□ 0.11
SPTLC2-202ENST00000554365 ZBTB42B2RXF5 422 aa15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 IPO5O00410 1097 aaKnown RBP15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 EDIL3O43854 480 aa15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 ATP4AP20648 1035 aa15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 CBX2Q14781 532 aaPredicted RBP15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 PLPP4Q5VZY2 271 aa15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 FAM43BQ6ZT52 329 aaPredicted RBP15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 REXO1Q8N1G1 1221 aaKnown RBP15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 PRSS33Q8NF86 280 aa15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 VN1R2Q8NFZ6 395 aa15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 BICD2Q8TD16 824 aa15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 CDCA3Q99618 268 aaPredicted RBP15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 ZNF577Q9BSK1 485 aa15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 ZSCAN16Q9H4T2 348 aaPredicted RBP15.74■□□□□ 0.11
SPTLC2-202ENST00000554365 BRMS1Q9HCU9 246 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms