RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 RIMBP2O15034 1052 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 AGTP01019 485 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 MMEP08473 750 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 SLC9A1P19634 815 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 KLRC3Q07444 240 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L24Q0WX57 530 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 DHX34Q14147 1143 aaKnown RBP13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 PPP1R7Q15435 360 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 TNFAIP8L3Q5GJ75 292 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 HIBCHQ6NVY1 386 aaPredicted RBP13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 USP17L6PQ6QN14 398 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 BTNL9Q6UXG8 535 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 GPBP1Q86WP2 473 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 MDM1Q8TC05 714 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 NEK9Q8TD19 979 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 RSRC1Q96IZ7 334 aaKnown RBP13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 NAP1L4Q99733 375 aaKnown RBP13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 ATP8A1Q9Y2Q0 1164 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 LTBP4Q8N2S1 1624 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 GTPBP10A4D1E9 387 aaKnown RBP13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 BACH1O14867 736 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 PLA2G4BP0C869 781 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 SLURP2P0DP57 97 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 CLNS1AP54105 237 aaKnown RBP13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 PMS2P54278 862 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 E2F5Q15329 346 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 EPHA7Q15375 998 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 C6orf118Q5T5N4 469 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 DAAM2Q86T65 1068 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 SLC30A5Q8TAD4 765 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 CELF4Q9BZC1 486 aaKnown RBP13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 ZHX3Q9H4I2 956 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 ARMCX3Q9UH62 379 aaPredicted RBP13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 AFF2P51816 1311 aa13.85□□□□□ -0.19
CALCOCO1-217ENST00000549935 EP400Q96L91 3159 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 DDX3XO00571 662 aaKnown RBP eCLIP13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 DDX3YO15523 660 aaKnown RBP13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 SERPINB2P05120 415 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 KRT18P05783 430 aaKnown RBP13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 ACTN1P12814 892 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 FERP16591 822 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 CYP11B2P19099 503 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 NR2F2P24468 414 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 STAT3P40763 770 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 DR1Q01658 176 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 PPATQ06203 517 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 ADCY2Q08462 1091 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 TRPM8Q7Z2W7 1104 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 METTL14Q9HCE5 456 aaKnown RBP13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 LRRC4CQ9HCJ2 640 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 SIX2Q9NPC8 291 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 SAMD15Q9P1V8 674 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 TRPC6Q9Y210 931 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 ARFGEF1Q9Y6D6 1849 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 BBOX1O75936 387 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 FGGP02679 453 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 TMEM253P0C7T8 217 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 SHMT1P34896 483 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 SCNN1DP51172 638 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 DENND2CQ68D51 928 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 MOV10L1Q9BXT6 1211 aaKnown RBP13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 NSRP1Q9H0G5 558 aaKnown RBP13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 STMN4Q9H169 189 aaPredicted RBP13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 DPH5Q9H2P9 285 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 DAAM1Q9Y4D1 1078 aa13.84□□□□□ -0.19
CALCOCO1-217ENST00000549935 GOLGA6L10A0A0M3HER8 536 aa13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 PDXKO00764 312 aa13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 SLC16A3O15427 465 aaKnown RBP13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 GBP2P32456 591 aaPredicted RBP13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 EPM2AIP1Q7L775 607 aaPredicted RBP13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 PROCA1Q8NCQ7 364 aaPredicted RBP13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 OLIG1Q8TAK6 271 aa13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 RFFLQ8WZ73 363 aa13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 LRRC4BQ9NT99 713 aa13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 USP40Q9NVE5 1235 aa13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 C15orf41Q9Y2V0 281 aa13.83□□□□□ -0.2
CALCOCO1-217ENST00000549935 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 KIAA0391O15091 583 aaKnown RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 ATP2C2O75185 946 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 MED24O75448 989 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 OAS1P00973 400 aaKnown RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 SHBGP04278 402 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 POTEIP0CG38 1075 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 XRCC5P13010 732 aaKnown RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 GYS1P13807 737 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 HSPA6P17066 643 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 LMNB1P20700 586 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 ZNF131P52739 623 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 GALCP54803 685 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 PLS1Q14651 629 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 KNOP1Q1ED39 458 aaKnown RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 KIAA1755Q5JYT7 1200 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 ZDHHC24Q6UX98 284 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 LRRC34Q8IZ02 419 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 CERS5Q8N5B7 392 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms