RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ITGB8P26012 769 aa25.72■■□□□ 1.71
SMARCD1-203ENST00000547247 CDC42EP1Q00587 391 aa25.72■■□□□ 1.71
SMARCD1-203ENST00000547247 TMEM62Q0P6H9 643 aa25.72■■□□□ 1.71
SMARCD1-203ENST00000547247 LRRC8DQ7L1W4 858 aa25.72■■□□□ 1.71
SMARCD1-203ENST00000547247 ZNF710Q8N1W2 664 aa25.72■■□□□ 1.71
SMARCD1-203ENST00000547247 RSPH10B2B2RC85 870 aa25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 GADD45BO75293 160 aaPredicted RBP25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 PRPF40AO75400 957 aaKnown RBP25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 RSPH10BP0C881 870 aa25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 GUCY2CP25092 1073 aa25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 CCL23P55773 120 aa25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 FAM26DQ5JW98 314 aa25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 FAM102BQ5T8I3 360 aa25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 PRPF31Q8WWY3 499 aaKnown RBP25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 TIPINQ9BVW5 301 aa25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 WNT8AQ9H1J5 351 aa25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 GPRC5CQ9NQ84 441 aa25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 USP25Q9UHP3 1055 aa25.71■■□□□ 1.71
SMARCD1-203ENST00000547247 ASAP2O43150 1006 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 IQCF3P0C7M6 154 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 ARL2P36404 184 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 NLRP11P59045 1033 aaKnown RBP25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 MXD4Q14582 209 aaPredicted RBP25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 ARSHQ5FYA8 562 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 RHPN2Q8IUC4 686 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 CEP57L1Q8IYX8 460 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 POLR3FQ9H1D9 316 aaPredicted RBP25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 MAGEF1Q9HAY2 307 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 PCDH10Q9P2E7 1040 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 COL4A3BPQ9Y5P4 624 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 TRPV2Q9Y5S1 764 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 CDY2AQ9Y6F7 541 aa25.7■■□□□ 1.71
SMARCD1-203ENST00000547247 CHRNA1P02708 482 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 UBE2HP62256 183 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 MGAT3Q09327 533 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 MFSD5Q6N075 450 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 TRAF7Q6Q0C0 670 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 KIFAP3Q92845 792 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 CELF4Q9BZC1 486 aaKnown RBP25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 TNMDQ9H2S6 317 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 SERTAD1Q9UHV2 236 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 GINS2Q9Y248 185 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 CEP290O15078 2479 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 GOLGA6L22H0YM25 854 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 PARNO95453 639 aaKnown RBP25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 KRT18P05783 430 aaKnown RBP25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 SLFN14P0C7P3 912 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 GPC3P51654 580 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 RAD51AP2Q09MP3 1159 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 KIZQ2M2Z5 673 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 TMEM199Q8N511 208 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 SCLYQ96I15 445 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 DRC1Q96MC2 740 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 PPP1R16BQ96T49 567 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 LRRC27Q9C0I9 530 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 KBTBD4Q9NVX7 518 aa25.69■■□□□ 1.7
SMARCD1-203ENST00000547247 LTBP2Q14767 1821 aa25.68■■□□□ 1.7
SMARCD1-203ENST00000547247 HIP1RO75146 1068 aa25.68■■□□□ 1.7
SMARCD1-203ENST00000547247 GPR32O75388 356 aa25.68■■□□□ 1.7
SMARCD1-203ENST00000547247 ZNF202O95125 648 aa25.68■■□□□ 1.7
SMARCD1-203ENST00000547247 AMPD3Q01432 767 aa25.68■■□□□ 1.7
SMARCD1-203ENST00000547247 LAMTOR4Q0VGL1 99 aa25.68■■□□□ 1.7
SMARCD1-203ENST00000547247 LONRF3Q496Y0 759 aa25.68■■□□□ 1.7
SMARCD1-203ENST00000547247 KSR1Q8IVT5 923 aa25.68■■□□□ 1.7
SMARCD1-203ENST00000547247 SCLT1Q96NL6 688 aa25.68■■□□□ 1.7
SMARCD1-203ENST00000547247 POLD4Q9HCU8 107 aa25.68■■□□□ 1.7
SMARCD1-203ENST00000547247 NPHP3-ACAD11A0A0J9YXS1 232 aa25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 ACTN4O43707 911 aaKnown RBP25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 CRYBB1P53674 252 aaPredicted RBP25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 FAM160A1Q05DH4 1040 aa25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 ZNF410Q86VK4 478 aa25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 NLRP7Q8WX94 980 aa25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 STAMQ92783 540 aa25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 BADQ92934 168 aa25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 ZNF668Q96K58 619 aaPredicted RBP25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 NLRP4Q96MN2 994 aa25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 LBHD1Q9BQE6 289 aaPredicted RBP25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 REEP2Q9BRK0 252 aa25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 ADAMTS10Q9H324 1103 aa25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 ODF2LQ9ULJ1 636 aa25.67■■□□□ 1.7
SMARCD1-203ENST00000547247 MYMKA6NI61 221 aa25.66■■□□□ 1.7
SMARCD1-203ENST00000547247 GLRA2P23416 452 aa25.66■■□□□ 1.7
SMARCD1-203ENST00000547247 GIT2Q14161 759 aa25.66■■□□□ 1.7
SMARCD1-203ENST00000547247 TFDP1Q14186 410 aa25.66■■□□□ 1.7
SMARCD1-203ENST00000547247 FMR1NBQ8N0W7 255 aaPredicted RBP25.66■■□□□ 1.7
SMARCD1-203ENST00000547247 DAW1Q8N136 415 aa25.66■■□□□ 1.7
SMARCD1-203ENST00000547247 ASAP3Q8TDY4 903 aa25.66■■□□□ 1.7
SMARCD1-203ENST00000547247 DDX12PQ92771 950 aa25.66■■□□□ 1.7
SMARCD1-203ENST00000547247 CDHR5Q9HBB8 845 aa25.66■■□□□ 1.7
SMARCD1-203ENST00000547247 SRGAP2CP0DJJ0 459 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 RFC2P35250 354 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 MAPK7Q13164 816 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 MBTPS1Q14703 1052 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 DYMQ7RTS9 669 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 RNF149Q8NC42 400 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 CNNM3Q8NE01 707 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 ENGASEQ8NFI3 743 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 IFT74Q96LB3 600 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 OSMRQ99650 979 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 TANC1Q9C0D5 1861 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms