RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 SAMD15Q9P1V8 674 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 CEP72Q9P209 647 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 AMFRQ9UKV5 643 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 WDR91A4D1P6 747 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 SHOX2O60902 331 aaPredicted RBP15.9■□□□□ 0.14
HOXC11-202ENST00000546378 AKAP3O75969 853 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 TNFAIP3P21580 790 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 NUGGCQ68CJ6 796 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 GUF1Q8N442 669 aaKnown RBP15.9■□□□□ 0.14
HOXC11-202ENST00000546378 CNKSR1Q969H4 720 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 COA1Q9GZY4 146 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 VEZTQ9HBM0 779 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 USP40Q9NVE5 1235 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 ORC4O43929 436 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 FECHP22830 423 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 SCTRP47872 440 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 CCDC63Q8NA47 563 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 SUPT20HQ8NEM7 779 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 ZNF277Q9NRM2 450 aaPredicted RBP15.89■□□□□ 0.13
HOXC11-202ENST00000546378 ASIC3Q9UHC3 531 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 NAGPAQ9UK23 515 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 TNRC6CQ9HCJ0 1690 aaKnown RBP15.89■□□□□ 0.13
HOXC11-202ENST00000546378 FLOT1O75955 427 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 DPEP1P16444 411 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 DR1Q01658 176 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 ZNF449Q6P9G9 518 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 KDM7AQ6ZMT4 941 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 SLC35G2Q8TBE7 412 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 RBM46Q8TBY0 533 aaKnown RBP15.89■□□□□ 0.13
HOXC11-202ENST00000546378 ABCF3Q9NUQ8 709 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 FGFR1OP2Q9NVK5 253 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 USTQ9Y2C2 406 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 DAAM1Q9Y4D1 1078 aa15.89■□□□□ 0.13
HOXC11-202ENST00000546378 CHUKO15111 745 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 MEI1Q5TIA1 1274 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 PPP1R18Q6NYC8 613 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 CCDC174Q6PII3 467 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 CCDC26Q8TAB7 109 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 ATG4AQ8WYN0 398 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 PSMD1Q99460 953 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 THAP2Q9H0W7 228 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 HMGB1P1B2RPK0 211 aaPredicted RBP15.88■□□□□ 0.13
HOXC11-202ENST00000546378 SMAD1Q15797 465 aaKnown RBP15.88■□□□□ 0.13
HOXC11-202ENST00000546378 SLC30A5Q8TAD4 765 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 TBC1D22AQ8WUA7 517 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 ARHGEF26Q96DR7 871 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 ZMYND12Q9H0C1 365 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 TMBIM4Q9HC24 238 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 KLHL11Q9NVR0 708 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 USP20Q9Y2K6 914 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 DAGLAQ9Y4D2 1042 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 C4AP0C0L4 1744 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 IGSF9BQ9UPX0 1349 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 FAM13AO94988 1023 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 STAT1P42224 750 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 GRIPAP1Q4V328 841 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 RUFY4Q6ZNE9 571 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 LARGE2Q8N3Y3 721 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 INPP4AQ96PE3 977 aaPredicted RBP15.88■□□□□ 0.13
HOXC11-202ENST00000546378 REEP2Q9BRK0 252 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 ALG13Q9NP73 1137 aaKnown RBP15.88■□□□□ 0.13
HOXC11-202ENST00000546378 INTUQ9ULD6 942 aa15.88■□□□□ 0.13
HOXC11-202ENST00000546378 TAF1LQ8IZX4 1826 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 KLRG2A4D1S0 409 aaPredicted RBP15.87■□□□□ 0.13
HOXC11-202ENST00000546378 ECE2O60344 883 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 DIAPH2O60879 1101 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 PDHA1P08559 390 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 IL1R1P14778 569 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 ELF1P32519 619 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 GCKP35557 465 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 KCNJ2P63252 427 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 NEDD9Q14511 834 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 SLC20A1Q8WUM9 679 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 KRT35Q92764 455 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 SCN7AQ01118 1682 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 RREB1Q92766 1687 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 DLATP10515 647 aaKnown RBP15.87■□□□□ 0.13
HOXC11-202ENST00000546378 LLGL2Q6P1M3 1020 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 CCDC197Q8NCU1 140 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 WHAMMQ8TF30 809 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 PURBQ96QR8 312 aaKnown RBP15.87■□□□□ 0.13
HOXC11-202ENST00000546378 DDX23Q9BUQ8 820 aaKnown RBP15.87■□□□□ 0.13
HOXC11-202ENST00000546378 RTFDC1Q9BY42 306 aaPredicted RBP15.87■□□□□ 0.13
HOXC11-202ENST00000546378 LY75O60449 1722 aa15.87■□□□□ 0.13
HOXC11-202ENST00000546378 TCRBV7S2A1N4TA0A589 114 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 PALM3A6NDB9 673 aaPredicted RBP15.86■□□□□ 0.13
HOXC11-202ENST00000546378 EXOC3O60645 756 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 AFPP02771 609 aaKnown RBP15.86■□□□□ 0.13
HOXC11-202ENST00000546378 DRAP1Q14919 205 aaPredicted RBP15.86■□□□□ 0.13
HOXC11-202ENST00000546378 FUKQ8N0W3 1084 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 TTLL6Q8N841 843 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 ANKS4BQ8N8V4 417 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 AK8Q96MA6 479 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 RUSC1Q9BVN2 902 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 VCPKMTQ9H867 229 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 GDF3Q9NR23 364 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 HOMER2Q9NSB8 354 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.86■□□□□ 0.13
HOXC11-202ENST00000546378 SERPINA10Q9UK55 444 aa15.86■□□□□ 0.13
HOXC11-202ENST00000546378 BCORQ6W2J9 1755 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms