RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 FKBP3Q00688 224 aaKnown RBP33.54■■■□□ 2.96
CCM2-219ENST00000544363 DMP1Q13316 513 aaPredicted RBP33.54■■■□□ 2.96
CCM2-219ENST00000544363 KRT31Q15323 416 aa33.54■■■□□ 2.96
CCM2-219ENST00000544363 EDRF1Q3B7T1 1238 aa33.54■■■□□ 2.96
CCM2-219ENST00000544363 DRC7Q8IY82 874 aa33.54■■■□□ 2.96
CCM2-219ENST00000544363 TRIB2Q92519 343 aa33.54■■■□□ 2.96
CCM2-219ENST00000544363 MAGEC2Q9UBF1 373 aaPredicted RBP33.54■■■□□ 2.96
CCM2-219ENST00000544363 THSD7BQ9C0I4 1608 aa33.54■■■□□ 2.96
CCM2-219ENST00000544363 MAFO75444 373 aaPredicted RBP33.53■■■□□ 2.96
CCM2-219ENST00000544363 KCNA1Q09470 495 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 DGKDQ16760 1214 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 LRRC55Q6ZSA7 311 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 SPIRE2Q8WWL2 714 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 C16orf70Q9BSU1 422 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 POLR3FQ9H1D9 316 aaPredicted RBP33.53■■■□□ 2.96
CCM2-219ENST00000544363 TYW1Q9NV66 732 aaKnown RBP33.53■■■□□ 2.96
CCM2-219ENST00000544363 TRPC6Q9Y210 931 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 TPM3P06753 285 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 SMTNP53814 917 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 SPC24Q8NBT2 197 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 BSNDQ8WZ55 320 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 EEF2KMTQ96G04 330 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 NTPCRQ9BSD7 190 aaKnown RBP33.53■■■□□ 2.96
CCM2-219ENST00000544363 Q9Y3F1 56 aa33.53■■■□□ 2.96
CCM2-219ENST00000544363 A0A1B0GTH6 734 aa33.52■■■□□ 2.96
CCM2-219ENST00000544363 ZBTB42B2RXF5 422 aa33.52■■■□□ 2.96
CCM2-219ENST00000544363 CALUO43852 315 aaPredicted RBP33.52■■■□□ 2.96
CCM2-219ENST00000544363 NPTX2P47972 431 aa33.52■■■□□ 2.96
CCM2-219ENST00000544363 HAUS6Q7Z4H7 955 aa33.52■■■□□ 2.96
CCM2-219ENST00000544363 TLK2Q86UE8 772 aa33.52■■■□□ 2.96
CCM2-219ENST00000544363 CREBRFQ8IUR6 639 aa33.52■■■□□ 2.96
CCM2-219ENST00000544363 EXOC8Q8IYI6 725 aa33.52■■■□□ 2.96
CCM2-219ENST00000544363 RNPEPQ9H4A4 650 aa33.52■■■□□ 2.96
CCM2-219ENST00000544363 ZNF215Q9UL58 517 aaPredicted RBP33.52■■■□□ 2.96
CCM2-219ENST00000544363 A6NJR5 290 aa33.51■■■□□ 2.96
CCM2-219ENST00000544363 GPR25O00155 361 aa33.51■■■□□ 2.96
CCM2-219ENST00000544363 ZNF286BP0CG31 522 aa33.51■■■□□ 2.96
CCM2-219ENST00000544363 GTF2BQ00403 316 aa33.51■■■□□ 2.96
CCM2-219ENST00000544363 TBC1D8BQ0IIM8 1120 aa33.51■■■□□ 2.96
CCM2-219ENST00000544363 ZC3H3Q8IXZ2 948 aaKnown RBP33.51■■■□□ 2.96
CCM2-219ENST00000544363 CD99L2Q8TCZ2 262 aa33.51■■■□□ 2.96
CCM2-219ENST00000544363 IFT74Q96LB3 600 aa33.51■■■□□ 2.96
CCM2-219ENST00000544363 CNOT6LQ96LI5 555 aaKnown RBP33.51■■■□□ 2.96
CCM2-219ENST00000544363 INTS13Q9NVM9 706 aa33.51■■■□□ 2.96
CCM2-219ENST00000544363 ZMYM2Q9UBW7 1377 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 CCDC169A6NNP5 214 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 SLC16A4O15374 487 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 HOXD10P28358 340 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 NR1I3Q14994 352 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 KSR1Q8IVT5 923 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 TRPV1Q8NER1 839 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 TMEM143Q96AN5 459 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 CEP63Q96MT8 703 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 KMT5AQ9NQR1 393 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 KCNG1Q9UIX4 513 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 CASP8AP2Q9UKL3 1982 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 TGFB1I1O43294 461 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 PTMAP06454 111 aaKnown RBP33.5■■■□□ 2.95
CCM2-219ENST00000544363 CYBAP13498 195 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 AKR1A1P14550 325 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 ARL2P36404 184 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 COPB1P53618 953 aaKnown RBP33.5■■■□□ 2.95
CCM2-219ENST00000544363 FILIP1LQ4L180 1135 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 LENG1Q96BZ8 264 aaPredicted RBP33.5■■■□□ 2.95
CCM2-219ENST00000544363 SRRDQ9UH36 339 aa33.5■■■□□ 2.95
CCM2-219ENST00000544363 H3BRB1 525 aa33.49■■■□□ 2.95
CCM2-219ENST00000544363 ZNF484Q5JVG2 852 aa33.49■■■□□ 2.95
CCM2-219ENST00000544363 TMEM161BQ8NDZ6 487 aa33.49■■■□□ 2.95
CCM2-219ENST00000544363 TUT1Q9H6E5 874 aaKnown RBP33.49■■■□□ 2.95
CCM2-219ENST00000544363 TMEM206Q9H813 350 aa33.49■■■□□ 2.95
CCM2-219ENST00000544363 GOLGA6L6A8MZA4 724 aa33.48■■■□□ 2.95
CCM2-219ENST00000544363 GAS2O43903 313 aaKnown RBP33.48■■■□□ 2.95
CCM2-219ENST00000544363 FILIP1Q7Z7B0 1213 aa33.48■■■□□ 2.95
CCM2-219ENST00000544363 ACCSQ96QU6 501 aa33.48■■■□□ 2.95
CCM2-219ENST00000544363 JPH2Q9BR39 696 aaPredicted RBP33.48■■■□□ 2.95
CCM2-219ENST00000544363 AP5M1Q9H0R1 490 aa33.48■■■□□ 2.95
CCM2-219ENST00000544363 RTN4Q9NQC3 1192 aaKnown RBP33.48■■■□□ 2.95
CCM2-219ENST00000544363 TAB2Q9NYJ8 693 aa33.48■■■□□ 2.95
CCM2-219ENST00000544363 IGKV6-21A0A0C4DH24 114 aa33.47■■■□□ 2.95
CCM2-219ENST00000544363 ADAM9Q13443 819 aa33.47■■■□□ 2.95
CCM2-219ENST00000544363 HVCN1Q96D96 273 aa33.47■■■□□ 2.95
CCM2-219ENST00000544363 TRIM44Q96DX7 344 aaPredicted RBP33.47■■■□□ 2.95
CCM2-219ENST00000544363 GBP3Q9H0R5 595 aa33.47■■■□□ 2.95
CCM2-219ENST00000544363 SAGE1Q9NXZ1 904 aa33.47■■■□□ 2.95
CCM2-219ENST00000544363 CETN3O15182 167 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 NR2F2P24468 414 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 NFIL3Q16649 462 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 SYCP3Q8IZU3 236 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 VPS16Q9H269 839 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 N4BP3O15049 544 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 INSRRP14616 1297 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 GLRA2P23416 452 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 CPT1AP50416 773 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 PPP2R5AQ15172 486 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 IER5Q5VY09 327 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 HS2ST1Q7LGA3 356 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 ASAP3Q8TDY4 903 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 TRAPPC12Q8WVT3 735 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 TCP11Q8WWU5 503 aa33.46■■■□□ 2.95
CCM2-219ENST00000544363 TUBGCP2Q9BSJ2 902 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms