RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 MRPS6P82932 125 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 MLLT1Q03111 559 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 RAD51AP2Q09MP3 1159 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ZNF618Q5T7W0 954 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 C1orf186Q6ZWK4 172 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 LRRC8DQ7L1W4 858 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 RPAINQ86UA6 219 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 POLR3FQ9H1D9 316 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 GPRC5CQ9NQ84 441 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 KCND2Q9NZV8 630 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CDY2AQ9Y6F7 541 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 MYH11P35749 1972 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 TANC1Q9C0D5 1861 aa16.07■□□□□ 0.16
TNFRSF1A-216ENST00000543995 FAM237AA0A1B0GTK4 181 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 RSPH10B2B2RC85 870 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 RSPH10BP0C881 870 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 UBE2HP62256 183 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 RBL2Q08999 1139 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 PRPF31Q8WWY3 499 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 NLRP7Q8WX94 980 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 STAMQ92783 540 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ZNF668Q96K58 619 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 POLD4Q9HCU8 107 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 SERTAD1Q9UHV2 236 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 COL4A3BPQ9Y5P4 624 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 TRPV2Q9Y5S1 764 aa16.06■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ZNF202O95125 648 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 IQCF3P0C7M6 154 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 GUCY2CP25092 1073 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ITGB8P26012 769 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 NLRP11P59045 1033 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CDC42EP1Q00587 391 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 AMPD3Q01432 767 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 MXD4Q14582 209 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 KIZQ2M2Z5 673 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 SCLYQ96I15 445 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 NLRP4Q96MN2 994 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 TIPINQ9BVW5 301 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CELF4Q9BZC1 486 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 LRRC27Q9C0I9 530 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 WNT8AQ9H1J5 351 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 TNMDQ9H2S6 317 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 MAGEF1Q9HAY2 307 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 PCDH10Q9P2E7 1040 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 USP25Q9UHP3 1055 aa16.05■□□□□ 0.16
TNFRSF1A-216ENST00000543995 NPHP3-ACAD11A0A0J9YXS1 232 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ASAP2O43150 1006 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 HIP1RO75146 1068 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CHRNA1P02708 482 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 SRGAP2CP0DJJ0 459 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ARL2P36404 184 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 AFMP43652 599 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 GPC3P51654 580 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 FAM160A1Q05DH4 1040 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 LAMTOR4Q0VGL1 99 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 LONRF3Q496Y0 759 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ARSHQ5FYA8 562 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 MFSD5Q6N075 450 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 DYMQ7RTS9 669 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 KSR1Q8IVT5 923 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ZNF710Q8N1W2 664 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 TMEM199Q8N511 208 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CNNM3Q8NE01 707 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 KIFAP3Q92845 792 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 DRC1Q96MC2 740 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 LBHD1Q9BQE6 289 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 REEP2Q9BRK0 252 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ZHX3Q9H4I2 956 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 SCN5AQ14524 2016 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 SIP14410 1827 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 LTBP2Q14767 1821 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 SFI1A8K8P3 1242 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ACTN4O43707 911 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 TBCAO75347 108 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 GPR32O75388 356 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 SLFN14P0C7P3 912 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 MGAT3Q09327 533 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 TFDP1Q14186 410 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 FAM26DQ5JW98 314 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 RNF149Q8NC42 400 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 DDX12PQ92771 950 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 BADQ92934 168 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CCDC34Q96HJ3 373 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 IFT74Q96LB3 600 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 OSMRQ99650 979 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 KBTBD4Q9NVX7 518 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ODF2LQ9ULJ1 636 aa16.04■□□□□ 0.16
TNFRSF1A-216ENST00000543995 A0A087WZ62 844 aa16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 MYMKA6NI61 221 aa16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 LRRIQ4A6NIV6 560 aa16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 FAM13AO94988 1023 aa16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 PARNO95453 639 aaKnown RBP16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 LIG1P18858 919 aa16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 GLRA2P23416 452 aa16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CRYBB1P53674 252 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 PPP2R5AQ15172 486 aa16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 TRAF7Q6Q0C0 670 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms