RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 LARP1BQ659C4 914 aaKnown RBP17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 MAFAQ8NHW3 353 aaPredicted RBP17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 SLC7A3Q8WY07 619 aa17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 ZNF689Q96CS4 500 aaPredicted RBP17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 YME1L1Q96TA2 773 aa17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 GAS2L1Q99501 681 aaPredicted RBP17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 POLR3CQ9BUI4 534 aaPredicted RBP17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 CERS4Q9HA82 394 aa17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 TUFT1Q9NNX1 390 aa17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 RGS18Q9NS28 235 aa17.27■□□□□ 0.36
ECHDC2-223ENST00000542552 XIRP2A4UGR9 3374 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 RFXAPO00287 272 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 GAS2O43903 313 aaKnown RBP17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 DGKIO75912 1065 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 FAM189BP81408 668 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 RILPL1Q5EBL4 403 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 XKR9Q5GH70 373 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 MCTP1Q6DN14 999 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 ZNF410Q86VK4 478 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 CATSPER3Q86XQ3 398 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 NPAS4Q8IUM7 802 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 ARNTL2Q8WYA1 636 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 ZNF668Q96K58 619 aaPredicted RBP17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 TGS1Q96RS0 853 aaKnown RBP17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 ADAM2Q99965 735 aa17.26■□□□□ 0.35
ECHDC2-223ENST00000542552 C9IYK1 514 aa17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 LAD1O00515 517 aa17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 LPXNO60711 386 aa17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 MED24O75448 989 aa17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 RPA1P27694 616 aa17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 SARSP49591 514 aaKnown RBP17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 POLGP54098 1239 aaPredicted RBP17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 PDIA5Q14554 519 aa17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 KSR1Q8IVT5 923 aa17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 IGSF22Q8N9C0 903 aa17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 PRPF31Q8WWY3 499 aaKnown RBP17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 NLRP7Q8WX94 980 aa17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 C1orf112Q9NSG2 853 aa17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 COL4A4P53420 1690 aaPredicted RBP17.25■□□□□ 0.35
ECHDC2-223ENST00000542552 RALGAPA2Q2PPJ7 1873 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 NLRC5Q86WI3 1866 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 A0A087WZ62 844 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 LINC00271P0C7V0 271 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 PRPHP41219 470 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 RARRES1P49788 294 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 EMC2Q15006 297 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 IL17AQ16552 155 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 SLC24A5Q71RS6 500 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 RHPN2Q8IUC4 686 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 PIGOQ8TEQ8 1089 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 SNX21Q969T3 373 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 FDXACB1Q9BRP7 624 aaPredicted RBP17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 C17orf80Q9BSJ5 609 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 GCOM2Q9BZD3 368 aaPredicted RBP17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 IFT122Q9HBG6 1241 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 XPNPEP1Q9NQW7 623 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 COL4A3BPQ9Y5P4 624 aa17.24■□□□□ 0.35
ECHDC2-223ENST00000542552 ADGRA3Q8IWK6 1321 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 A0A087WWV3 80 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 DENND3A2RUS2 1198 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 K7ELQ4 463 aaPredicted RBP17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 STAG3L1P0CL83 205 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 MUTP22033 750 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 ATP2C1P98194 919 aaPredicted RBP17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 LAMTOR4Q0VGL1 99 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 GRB10Q13322 594 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 ERMNQ8TAM6 284 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 TCP11Q8WWU5 503 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 PSPC1Q8WXF1 523 aaKnown RBP17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 SAMD11Q96NU1 681 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 NACC1Q96RE7 527 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 LRWD1Q9UFC0 647 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 DBR1Q9UK59 544 aaKnown RBP17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 MTCH2Q9Y6C9 303 aa17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 PRRC2BQ5JSZ5 2229 aaKnown RBP17.23■□□□□ 0.35
ECHDC2-223ENST00000542552 VCANP13611 3396 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 ASAP2O43150 1006 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 CSDE1O75534 798 aaKnown RBP17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 DGAT1O75907 488 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 PDCP20941 246 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 FGFR4P22455 802 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 IGFBP4P22692 258 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 POTEGQ6S5H5 508 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 FERMT3Q86UX7 667 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 FIBCD1Q8N539 461 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 CLP1Q92989 425 aaKnown RBP17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 SCLT1Q96NL6 688 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 MTRQ99707 1265 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 INO80BQ9C086 356 aaPredicted RBP17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 ELAC1Q9H777 363 aaKnown RBP17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 MTUS1Q9ULD2 1270 aa17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 FNDC1Q4ZHG4 1894 aaPredicted RBP17.22■□□□□ 0.35
ECHDC2-223ENST00000542552 ARL2P36404 184 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 ECM1Q16610 540 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 EPC2Q52LR7 807 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 HAUS3Q68CZ6 603 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms