RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 NME8Q8N427 588 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 LINC01465Q8N7H1 131 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 DNAJC19Q96DA6 116 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 C17orf75Q9HAS0 396 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 SUCLA2Q9P2R7 463 aaPredicted RBP25.6■■□□□ 1.69
HOMER3-205ENST00000542541 COL4A3BPQ9Y5P4 624 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 MKI67P46013 3256 aaKnown RBP25.6■■□□□ 1.69
HOMER3-205ENST00000542541 PVALEFA0A1B0GWK0 134 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 ASAP2O43150 1006 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 B4GALT4O60513 344 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 FAM13AO94988 1023 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 SMC2O95347 1197 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 IDEP14735 1019 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 CLCN3P51790 818 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 RTP1P59025 263 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 CAMK4Q16566 473 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 CCDC65Q8IXS2 484 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 FAM126BQ8IXS8 530 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 KIAA0319LQ8IZA0 1049 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 CCDC47Q96A33 483 aaKnown RBP25.59■■□□□ 1.69
HOMER3-205ENST00000542541 ZBTB10Q96DT7 871 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 TRPV6Q9H1D0 765 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 POLR3FQ9H1D9 316 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-205ENST00000542541 TRAK2O60296 914 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 ARL2P36404 184 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 DPYDQ12882 1025 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 MKRN4PQ13434 485 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-205ENST00000542541 FAM49AQ9H0Q0 323 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-205ENST00000542541 ZHX3Q9H4I2 956 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 GPRC5CQ9NQ84 441 aa25.59■■□□□ 1.69
HOMER3-205ENST00000542541 LARSQ9P2J5 1176 aaKnown RBP25.59■■□□□ 1.69
HOMER3-205ENST00000542541 PQBP1O60828 265 aaKnown RBP25.58■■□□□ 1.69
HOMER3-205ENST00000542541 GAP43P17677 238 aa25.58■■□□□ 1.69
HOMER3-205ENST00000542541 CACNB1Q02641 598 aaPredicted RBP25.58■■□□□ 1.69
HOMER3-205ENST00000542541 PNOCQ13519 176 aa25.58■■□□□ 1.69
HOMER3-205ENST00000542541 PPP2R5AQ15172 486 aa25.58■■□□□ 1.69
HOMER3-205ENST00000542541 RUFY4Q6ZNE9 571 aa25.58■■□□□ 1.69
HOMER3-205ENST00000542541 PRPF31Q8WWY3 499 aaKnown RBP25.58■■□□□ 1.69
HOMER3-205ENST00000542541 IFT74Q96LB3 600 aa25.58■■□□□ 1.69
HOMER3-205ENST00000542541 PARVGQ9HBI0 331 aa25.58■■□□□ 1.69
HOMER3-205ENST00000542541 PANK4Q9NVE7 773 aa25.58■■□□□ 1.69
HOMER3-205ENST00000542541 AKT3Q9Y243 479 aa25.58■■□□□ 1.69
HOMER3-205ENST00000542541 CASP1P29466 404 aa25.57■■□□□ 1.68
HOMER3-205ENST00000542541 SOX10P56693 466 aa25.57■■□□□ 1.68
HOMER3-205ENST00000542541 MAPK7Q13164 816 aa25.57■■□□□ 1.68
HOMER3-205ENST00000542541 TRIM60Q495X7 471 aa25.57■■□□□ 1.68
HOMER3-205ENST00000542541 UNC13DQ70J99 1090 aa25.57■■□□□ 1.68
HOMER3-205ENST00000542541 RPAINQ86UA6 219 aa25.57■■□□□ 1.68
HOMER3-205ENST00000542541 DAW1Q8N136 415 aa25.57■■□□□ 1.68
HOMER3-205ENST00000542541 DNAJB3Q8WWF6 145 aa25.57■■□□□ 1.68
HOMER3-205ENST00000542541 CTAGE1Q96RT6 745 aa25.57■■□□□ 1.68
HOMER3-205ENST00000542541 CD4P01730 458 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 PRR29P0C7W0 189 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 PLS3P13797 630 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 ZNF131P52739 623 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 TLE2Q04725 743 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 DRP2Q13474 957 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 CCDC183Q5T5S1 534 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 MYCT1Q8N699 235 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 SMARCE1Q969G3 411 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 POLD4Q9HCU8 107 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 SEL1LQ9UBV2 794 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 ATP11BQ9Y2G3 1177 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 ARID2Q68CP9 1835 aa25.56■■□□□ 1.68
HOMER3-205ENST00000542541 FRMD3A2A2Y4 597 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 SFI1A8K8P3 1242 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 RSPH10B2B2RC85 870 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 RPN1P04843 607 aaKnown RBP25.55■■□□□ 1.68
HOMER3-205ENST00000542541 RSPH10BP0C881 870 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 TFDP1Q14186 410 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 RHPN2Q8IUC4 686 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 CCDC155Q8N6L0 562 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 GSDMAQ96QA5 445 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 PCDHA5Q9Y5H7 936 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 DNAH12Q6ZR08 3092 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 CAND2O75155 1236 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 SMTNP53814 917 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 LAMTOR4Q0VGL1 99 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 DMP1Q13316 513 aaPredicted RBP25.55■■□□□ 1.68
HOMER3-205ENST00000542541 LRRC26Q2I0M4 334 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 HERC4Q5GLZ8 1057 aaPredicted RBP25.55■■□□□ 1.68
HOMER3-205ENST00000542541 ODR4Q5SWX8 454 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 CAVIN1Q6NZI2 390 aaKnown RBP25.55■■□□□ 1.68
HOMER3-205ENST00000542541 RMND1Q9NWS8 449 aa25.55■■□□□ 1.68
HOMER3-205ENST00000542541 M0QZ92 97 aa25.54■■□□□ 1.68
HOMER3-205ENST00000542541 GLRA2P23416 452 aa25.54■■□□□ 1.68
HOMER3-205ENST00000542541 SLC17A8Q8NDX2 589 aa25.54■■□□□ 1.68
HOMER3-205ENST00000542541 SPATA20Q8TB22 786 aa25.54■■□□□ 1.68
HOMER3-205ENST00000542541 CAGE1Q8TC20 777 aa25.54■■□□□ 1.68
HOMER3-205ENST00000542541 EXOC1Q9NV70 894 aa25.54■■□□□ 1.68
HOMER3-205ENST00000542541 KIAA1468Q9P260 1216 aa25.54■■□□□ 1.68
HOMER3-205ENST00000542541 VTNP04004 478 aa25.53■■□□□ 1.68
HOMER3-205ENST00000542541 THPOP40225 353 aa25.53■■□□□ 1.68
HOMER3-205ENST00000542541 NAMPTP43490 491 aa25.53■■□□□ 1.68
HOMER3-205ENST00000542541 PEX3P56589 373 aa25.53■■□□□ 1.68
HOMER3-205ENST00000542541 POU5F1BQ06416 359 aa25.53■■□□□ 1.68
HOMER3-205ENST00000542541 BFSP2Q13515 415 aa25.53■■□□□ 1.68
HOMER3-205ENST00000542541 KCNB1Q14721 858 aa25.53■■□□□ 1.68
HOMER3-205ENST00000542541 ASAP3Q8TDY4 903 aa25.53■■□□□ 1.68
HOMER3-205ENST00000542541 SPIRE2Q8WWL2 714 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms