RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 ALAS1P13196 640 aa16.73■□□□□ 0.27
CACNA1E-208ENST00000533229 TKFCQ3LXA3 575 aa16.73■□□□□ 0.27
CACNA1E-208ENST00000533229 SND1Q7KZF4 910 aaKnown RBP eCLIP16.73■□□□□ 0.27
CACNA1E-208ENST00000533229 LNX1Q8TBB1 728 aaPredicted RBP16.73■□□□□ 0.27
CACNA1E-208ENST00000533229 TMEM150BA6NC51 233 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 F8VZ95 297 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 PPP1R12BO60237 982 aaPredicted RBP16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 FLOT1O75955 427 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 P4HBP07237 508 aaKnown RBP16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 NOP2P46087 812 aaKnown RBP16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 HNRNPH2P55795 449 aaKnown RBP16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 TAF3Q5VWG9 929 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 SYTL5Q8TDW5 730 aaPredicted RBP16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 AGO4Q9HCK5 861 aaKnown RBP16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 DNAJC12Q9UKB3 198 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 FRMD4BQ9Y2L6 1034 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 UBIAD1Q9Y5Z9 338 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 UBE4BO95155 1302 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 A0A0U1RQG5 324 aaPredicted RBP16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 LRRN2O75325 713 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 DLG4P78352 724 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 DRAP1Q14919 205 aaPredicted RBP16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 SLC30A5Q8TAD4 765 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 TAAR1Q96RJ0 339 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 STK33Q9BYT3 514 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 FAM204AQ9H8W3 233 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 SLC38A10Q9HBR0 1119 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 BCS1LQ9Y276 419 aa16.72■□□□□ 0.27
CACNA1E-208ENST00000533229 RGPD3A6NKT7 1758 aaPredicted RBP16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 RGPD4Q7Z3J3 1758 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 KIF13BQ9NQT8 1826 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 ESYT3A0FGR9 886 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 FAM170AA1A519 330 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 K7ENM7 598 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 KCNK3O14649 394 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 WDR46O15213 610 aaKnown RBP16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 EXOC3O60645 756 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 ZBTB48P10074 688 aaPredicted RBP16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 SOX5P35711 763 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 STAT1P42224 750 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 RARRES1P49788 294 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 STXBP4Q6ZWJ1 553 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 TRMT1LQ7Z2T5 733 aaKnown RBP16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 TPCN2Q8NHX9 752 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 U2AF1L4Q8WU68 220 aaKnown RBP16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 RUBCNQ92622 972 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 VPS33BQ9H267 617 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 PCIF1Q9H4Z3 704 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 SAMM50Q9Y512 469 aa16.71■□□□□ 0.27
CACNA1E-208ENST00000533229 CCDC66A2RUB6 948 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 ATP9AO75110 1047 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 KIF4AO95239 1232 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 FERP16591 822 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 EIF2AK2P19525 551 aaKnown RBP16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 RPS6P62753 249 aaKnown RBP16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 GHRHRQ02643 423 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 BFSP1Q12934 665 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 MTMR1Q13613 665 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 RPS6KA1Q15418 735 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 GLE1Q53GS7 698 aaKnown RBP16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 PCNX4Q63HM2 1172 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 PHLDB3Q6NSJ2 640 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 SLC9A9Q8IVB4 645 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 GLYCTKQ8IVS8 523 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 ZSWIM2Q8NEG5 633 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 LMO3Q8TAP4 145 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 NEK9Q8TD19 979 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 KRT12Q99456 494 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 SYT11Q9BT88 431 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 INTS2Q9H0H0 1204 aaKnown RBP16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 H2AFZP0C0S5 128 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 CARSP49589 748 aaKnown RBP16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 PPP2R5AQ15172 486 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 TRADDQ15628 312 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 UGCGQ16739 394 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 CIAPIN1Q6FI81 312 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 POTEAQ6S8J7 498 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 H2AFVQ71UI9 128 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 TSEN2Q8NCE0 465 aaKnown RBP16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 KIAA1683Q9H0B3 1180 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 GDF3Q9NR23 364 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 TMEM59LQ9UK28 342 aa16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 ASTN2O75129 1339 aaPredicted RBP16.7■□□□□ 0.26
CACNA1E-208ENST00000533229 ANXA13P27216 316 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 TNFRSF8P28908 595 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 GALCP54803 685 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 NIPA1Q7RTP0 329 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 DEFB132Q7Z7B7 95 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 MCF2L2Q86YR7 1114 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 LPAR1Q92633 364 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 WNK4Q96J92 1243 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 CBWD1Q9BRT8 395 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 EPB41L5Q9HCM4 733 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 LARSQ9P2J5 1176 aaKnown RBP16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 APEX2Q9UBZ4 518 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 SRCAPQ6ZRS2 3230 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 GOLGA6BA6NDN3 693 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms