RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CELF4Q9BZC1 486 aaKnown RBP7.11□□□□□ -1.27
PTPRK-220ENST00000531466 DENND2AQ9ULE3 1009 aa7.11□□□□□ -1.27
PTPRK-220ENST00000531466 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.1□□□□□ -1.27
PTPRK-220ENST00000531466 SLC12A8A0AV02 714 aa7.1□□□□□ -1.27
PTPRK-220ENST00000531466 TRAF5O00463 557 aa7.1□□□□□ -1.27
PTPRK-220ENST00000531466 HIP1RO75146 1068 aa7.1□□□□□ -1.27
PTPRK-220ENST00000531466 PTGS2P35354 604 aa7.1□□□□□ -1.27
PTPRK-220ENST00000531466 ADAM8P78325 824 aa7.1□□□□□ -1.27
PTPRK-220ENST00000531466 OVCH1Q7RTY7 1134 aa7.1□□□□□ -1.27
PTPRK-220ENST00000531466 RTN4RL1Q86UN2 441 aaPredicted RBP7.1□□□□□ -1.27
PTPRK-220ENST00000531466 CKAP2LQ8IYA6 745 aa7.1□□□□□ -1.27
PTPRK-220ENST00000531466 GPR150Q8NGU9 434 aa7.1□□□□□ -1.27
PTPRK-220ENST00000531466 HAS1Q92839 578 aa7.1□□□□□ -1.27
PTPRK-220ENST00000531466 GFM2Q969S9 779 aaKnown RBP7.1□□□□□ -1.27
PTPRK-220ENST00000531466 FOXRED1Q96CU9 486 aaPredicted RBP7.1□□□□□ -1.27
PTPRK-220ENST00000531466 XDHP47989 1333 aa7.09□□□□□ -1.27
PTPRK-220ENST00000531466 STK10O94804 968 aaKnown RBP7.09□□□□□ -1.27
PTPRK-220ENST00000531466 ANTXR2P58335 489 aa7.09□□□□□ -1.27
PTPRK-220ENST00000531466 HNRNPA0Q13151 305 aaKnown RBP7.09□□□□□ -1.27
PTPRK-220ENST00000531466 MBNL2Q5VZF2 373 aaKnown RBP7.09□□□□□ -1.27
PTPRK-220ENST00000531466 VRK3Q8IV63 474 aa7.09□□□□□ -1.27
PTPRK-220ENST00000531466 OR5AN1Q8NGI8 311 aa7.09□□□□□ -1.27
PTPRK-220ENST00000531466 SLC25A43Q8WUT9 341 aaPredicted RBP7.09□□□□□ -1.27
PTPRK-220ENST00000531466 TCF25Q9BQ70 676 aa7.09□□□□□ -1.27
PTPRK-220ENST00000531466 KLRG2A4D1S0 409 aaPredicted RBP7.08□□□□□ -1.28
PTPRK-220ENST00000531466 PROZP22891 400 aa7.08□□□□□ -1.28
PTPRK-220ENST00000531466 RGS3P49796 1198 aa7.08□□□□□ -1.28
PTPRK-220ENST00000531466 RABGGTBP53611 331 aa7.08□□□□□ -1.28
PTPRK-220ENST00000531466 IRF9Q00978 393 aa7.08□□□□□ -1.28
PTPRK-220ENST00000531466 FKBP15Q5T1M5 1219 aa7.08□□□□□ -1.28
PTPRK-220ENST00000531466 ELOA2Q8IYF1 753 aaPredicted RBP7.08□□□□□ -1.28
PTPRK-220ENST00000531466 MB21D1Q8N884 522 aa7.08□□□□□ -1.28
PTPRK-220ENST00000531466 MAGEB10Q96LZ2 347 aaPredicted RBP7.08□□□□□ -1.28
PTPRK-220ENST00000531466 FOXB1Q99853 325 aa7.08□□□□□ -1.28
PTPRK-220ENST00000531466 IL23AQ9NPF7 189 aa7.08□□□□□ -1.28
PTPRK-220ENST00000531466 NUDT3O95989 172 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 GCP02774 474 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 APPP05067 770 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 IL12RB1P42701 662 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 SMAD3P84022 425 aaKnown RBP7.07□□□□□ -1.28
PTPRK-220ENST00000531466 SLC6A3Q01959 620 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 RABL3Q5HYI8 236 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 ZNF276Q8N554 614 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 GSTCDQ8NEC7 633 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 SLC7A14Q8TBB6 771 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 ATXN2LQ8WWM7 1075 aaKnown RBP7.07□□□□□ -1.28
PTPRK-220ENST00000531466 MLST8Q9BVC4 326 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 CCDC113Q9H0I3 377 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 RCAN3Q9UKA8 241 aa7.07□□□□□ -1.28
PTPRK-220ENST00000531466 KDM2BQ8NHM5 1336 aa7.06□□□□□ -1.28
PTPRK-220ENST00000531466 EFCAB14O75071 495 aa7.06□□□□□ -1.28
PTPRK-220ENST00000531466 LMO1P25800 156 aa7.06□□□□□ -1.28
PTPRK-220ENST00000531466 ADRA1BP35368 520 aa7.06□□□□□ -1.28
PTPRK-220ENST00000531466 C2orf69Q8N8R5 385 aa7.06□□□□□ -1.28
PTPRK-220ENST00000531466 SCLYQ96I15 445 aa7.06□□□□□ -1.28
PTPRK-220ENST00000531466 MNTQ99583 582 aa7.06□□□□□ -1.28
PTPRK-220ENST00000531466 TRPS1Q9UHF7 1281 aa7.06□□□□□ -1.28
PTPRK-220ENST00000531466 KRT37O76014 449 aa7.05□□□□□ -1.28
PTPRK-220ENST00000531466 DGKDQ16760 1214 aa7.05□□□□□ -1.28
PTPRK-220ENST00000531466 KRT40Q6A162 431 aa7.05□□□□□ -1.28
PTPRK-220ENST00000531466 ABHD17CQ6PCB6 329 aa7.05□□□□□ -1.28
PTPRK-220ENST00000531466 IGSF22Q8N9C0 903 aa7.05□□□□□ -1.28
PTPRK-220ENST00000531466 NKD2Q969F2 451 aaPredicted RBP7.05□□□□□ -1.28
PTPRK-220ENST00000531466 TOX4O94842 621 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 PRLP01236 227 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 ZBTB48P10074 688 aaPredicted RBP7.04□□□□□ -1.28
PTPRK-220ENST00000531466 ROM1Q03395 351 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 GAGE13Q4V321 117 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 TMEM177Q53S58 311 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 C1QL3Q5VWW1 255 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 RHOUQ7L0Q8 258 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 CLEC14AQ86T13 490 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 SYNE4Q8N205 404 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 LENG9Q96B70 501 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 ARL8AQ96BM9 186 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 NCDNQ9UBB6 729 aa7.04□□□□□ -1.28
PTPRK-220ENST00000531466 PPP1R1BQ9UD71 204 aaPredicted RBP7.04□□□□□ -1.28
PTPRK-220ENST00000531466 GOLGA6L6A8MZA4 724 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 LMNAP02545 664 aaKnown RBP7.03□□□□□ -1.28
PTPRK-220ENST00000531466 VSIG10L2P0DP72 767 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 KCNA6P17658 529 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 NR4A1P22736 598 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 LONRF2Q1L5Z9 754 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 SLFN12LQ6IEE8 588 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 CC2D1AQ6P1N0 951 aaPredicted RBP7.03□□□□□ -1.28
PTPRK-220ENST00000531466 PLA2G15Q8NCC3 412 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 PROKR1Q8TCW9 393 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 DYDC2Q96IM9 177 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 BOCQ9BWV1 1114 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 SFMBT1Q9UHJ3 866 aa7.03□□□□□ -1.28
PTPRK-220ENST00000531466 TCRBV16S1A1N1A0A5B0 115 aa7.02□□□□□ -1.29
PTPRK-220ENST00000531466 RHOBTB3O94955 611 aa7.02□□□□□ -1.29
PTPRK-220ENST00000531466 CCDC142Q17RM4 750 aa7.02□□□□□ -1.29
PTPRK-220ENST00000531466 HTR3DQ70Z44 454 aa7.02□□□□□ -1.29
PTPRK-220ENST00000531466 BRAPQ7Z569 592 aa7.02□□□□□ -1.29
PTPRK-220ENST00000531466 E2F7Q96AV8 911 aa7.02□□□□□ -1.29
PTPRK-220ENST00000531466 ZNF512Q96ME7 567 aaPredicted RBP7.02□□□□□ -1.29
PTPRK-220ENST00000531466 WDR92Q96MX6 357 aa7.02□□□□□ -1.29
PTPRK-220ENST00000531466 ZNHIT2Q9UHR6 403 aa7.02□□□□□ -1.29
PTPRK-220ENST00000531466 DNAI1Q9UI46 699 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms