RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SLC26A2P50443 739 aa21.59■■□□□ 1.05
SSRP1-204ENST00000529002 FAM160B1Q5W0V3 765 aa21.59■■□□□ 1.05
SSRP1-204ENST00000529002 VPS52Q8N1B4 723 aa21.59■■□□□ 1.05
SSRP1-204ENST00000529002 DTWD2Q8NBA8 298 aa21.59■■□□□ 1.05
SSRP1-204ENST00000529002 CYP26B1Q9NR63 512 aa21.59■■□□□ 1.05
SSRP1-204ENST00000529002 DMXL1Q9Y485 3027 aa21.59■■□□□ 1.05
SSRP1-204ENST00000529002 WDR87Q6ZQQ6 2873 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 MEIS1O00470 390 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 HOXA2O43364 376 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 PRC1O43663 620 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 GNAQP50148 359 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 BCAR1P56945 870 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 NLRP11P59045 1033 aaKnown RBP21.58■■□□□ 1.05
SSRP1-204ENST00000529002 WWC2Q6AWC2 1192 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 KIAA2013Q8IYS2 634 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 SIX5Q8N196 739 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 PLCD3Q8N3E9 789 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 KCNG4Q8TDN1 519 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 SLC22A17Q8WUG5 538 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 ANO3Q9BYT9 981 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 ZBP1Q9H171 429 aa21.58■■□□□ 1.05
SSRP1-204ENST00000529002 CEP250Q9BV73 2442 aa21.58■■□□□ 1.04
SSRP1-204ENST00000529002 FANCMQ8IYD8 2048 aa21.57■■□□□ 1.04
SSRP1-204ENST00000529002 SH2B2O14492 632 aaPredicted RBP21.57■■□□□ 1.04
SSRP1-204ENST00000529002 DHX15O43143 795 aaKnown RBP21.57■■□□□ 1.04
SSRP1-204ENST00000529002 NARSO43776 548 aaKnown RBP21.57■■□□□ 1.04
SSRP1-204ENST00000529002 CKAP2LQ8IYA6 745 aa21.57■■□□□ 1.04
SSRP1-204ENST00000529002 LRRC71Q8N4P6 559 aa21.57■■□□□ 1.04
SSRP1-204ENST00000529002 BCL7CQ8WUZ0 217 aaPredicted RBP21.57■■□□□ 1.04
SSRP1-204ENST00000529002 ADAMTS10Q9H324 1103 aa21.57■■□□□ 1.04
SSRP1-204ENST00000529002 USTQ9Y2C2 406 aa21.57■■□□□ 1.04
SSRP1-204ENST00000529002 R4GN57 208 aa21.57■■□□□ 1.04
SSRP1-204ENST00000529002 CACNA1IQ9P0X4 2223 aa21.57■■□□□ 1.04
SSRP1-204ENST00000529002 DOCK8Q8NF50 2099 aa21.57■■□□□ 1.04
SSRP1-204ENST00000529002 NCOR2Q9Y618 2525 aa21.57■■□□□ 1.04
SSRP1-204ENST00000529002 OTOGLQ3ZCN5 2332 aa21.56■■□□□ 1.04
SSRP1-204ENST00000529002 CCDC69A6NI79 296 aa21.56■■□□□ 1.04
SSRP1-204ENST00000529002 CSDE1O75534 798 aaKnown RBP21.56■■□□□ 1.04
SSRP1-204ENST00000529002 ZSCAN20P17040 1043 aaPredicted RBP21.56■■□□□ 1.04
SSRP1-204ENST00000529002 CHMLP26374 656 aa21.56■■□□□ 1.04
SSRP1-204ENST00000529002 LONRF3Q496Y0 759 aa21.56■■□□□ 1.04
SSRP1-204ENST00000529002 CASC1Q6TDU7 716 aa21.56■■□□□ 1.04
SSRP1-204ENST00000529002 ZNF598Q86UK7 904 aaKnown RBP21.56■■□□□ 1.04
SSRP1-204ENST00000529002 LRRC2Q9BYS8 371 aa21.56■■□□□ 1.04
SSRP1-204ENST00000529002 DZANK1Q9NVP4 752 aa21.56■■□□□ 1.04
SSRP1-204ENST00000529002 FBXL21Q9UKT6 434 aa21.56■■□□□ 1.04
SSRP1-204ENST00000529002 AKT3Q9Y243 479 aa21.56■■□□□ 1.04
SSRP1-204ENST00000529002 DNAH14Q0VDD8 3507 aa21.56■■□□□ 1.04
SSRP1-204ENST00000529002 TDGQ13569 410 aa21.55■■□□□ 1.04
SSRP1-204ENST00000529002 MIS18BP1Q6P0N0 1132 aa21.55■■□□□ 1.04
SSRP1-204ENST00000529002 TMTC3Q6ZXV5 915 aa21.55■■□□□ 1.04
SSRP1-204ENST00000529002 RIN2Q8WYP3 895 aaPredicted RBP21.55■■□□□ 1.04
SSRP1-204ENST00000529002 TMEM169Q96HH4 297 aa21.55■■□□□ 1.04
SSRP1-204ENST00000529002 KCNK12Q9HB15 430 aa21.55■■□□□ 1.04
SSRP1-204ENST00000529002 FAM86B1E9PN63 330 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 ZC3H11AO75152 810 aaKnown RBP eCLIP21.54■■□□□ 1.04
SSRP1-204ENST00000529002 FAM86B2P0C5J1 330 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 ZNF76P36508 570 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 ALDH7A1P49419 539 aaKnown RBP21.54■■□□□ 1.04
SSRP1-204ENST00000529002 NAPAP54920 295 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 TTC22Q5TAA0 569 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 EFCAB12Q6NXP0 572 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 FAM43BQ6ZT52 329 aaPredicted RBP21.54■■□□□ 1.04
SSRP1-204ENST00000529002 DGLUCYQ7Z3D6 616 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 PLA2G4DQ86XP0 818 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 TMEM87AQ8NBN3 555 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 RSAD2Q8WXG1 361 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 BBXQ8WY36 941 aaPredicted RBP21.54■■□□□ 1.04
SSRP1-204ENST00000529002 LPPQ93052 612 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 VN1R3Q9BXE9 311 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 RIC8AQ9NPQ8 531 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 DUSP12Q9UNI6 340 aa21.54■■□□□ 1.04
SSRP1-204ENST00000529002 RBM8AQ9Y5S9 174 aaKnown RBP21.54■■□□□ 1.04
SSRP1-204ENST00000529002 TPRP12270 2363 aaKnown RBP21.54■■□□□ 1.04
SSRP1-204ENST00000529002 DOCK6Q96HP0 2047 aa21.53■■□□□ 1.04
SSRP1-204ENST00000529002 CFHP08603 1231 aa21.53■■□□□ 1.04
SSRP1-204ENST00000529002 EIF4BP23588 611 aaKnown RBP21.53■■□□□ 1.04
SSRP1-204ENST00000529002 GPR149Q86SP6 731 aa21.53■■□□□ 1.04
SSRP1-204ENST00000529002 CABP7Q86V35 215 aa21.53■■□□□ 1.04
SSRP1-204ENST00000529002 LINC01465Q8N7H1 131 aa21.53■■□□□ 1.04
SSRP1-204ENST00000529002 RTP3Q9BQQ7 232 aa21.53■■□□□ 1.04
SSRP1-204ENST00000529002 MAFBQ9Y5Q3 323 aaPredicted RBP21.53■■□□□ 1.04
SSRP1-204ENST00000529002 SPTBN2O15020 2390 aa21.53■■□□□ 1.04
SSRP1-204ENST00000529002 CNTNAP5Q8WYK1 1306 aa21.53■■□□□ 1.04
SSRP1-204ENST00000529002 A0A0U1RQF3 1178 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 KRBA1A5PL33 1030 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 MEIS3P2A8K0S8 358 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 STK25O00506 426 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 ADAMTS3O15072 1205 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 N4BP1O75113 896 aaKnown RBP21.52■■□□□ 1.04
SSRP1-204ENST00000529002 KRT37O76014 449 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 LMNAP02545 664 aaKnown RBP21.52■■□□□ 1.04
SSRP1-204ENST00000529002 CTSAP10619 480 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 SREBF1P36956 1147 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 CCDC149Q6ZUS6 474 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 MICU3Q86XE3 530 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 DCLK2Q8N568 766 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 FANCBQ8NB91 859 aa21.52■■□□□ 1.04
SSRP1-204ENST00000529002 ACSF2Q96CM8 615 aaPredicted RBP21.52■■□□□ 1.04
SSRP1-204ENST00000529002 GABBR1Q9UBS5 961 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms