RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 FAM184BQ9ULE4 1060 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 COL4A3BPQ9Y5P4 624 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 A0A1W2PQ45 241 aaPredicted RBP12.93□□□□□ -0.34
USF1-208ENST00000528768 A0A1W2PQY0 241 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 CTAGE9A4FU28 777 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 EFCAB8A8MWE9 144 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 E9PMD0 336 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 CETN3O15182 167 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
USF1-208ENST00000528768 MSH4O15457 936 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 CALUO43852 315 aaPredicted RBP12.93□□□□□ -0.34
USF1-208ENST00000528768 EYA4O95677 639 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 CYP11B2P19099 503 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 IGFBP4P22692 258 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 RPL13P26373 211 aaKnown RBP12.93□□□□□ -0.34
USF1-208ENST00000528768 FAAP100Q0VG06 881 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 COG2Q14746 738 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 EDRF1Q3B7T1 1238 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 KCNK18Q7Z418 384 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 TMEM199Q8N511 208 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 CEP112Q8N8E3 955 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 NEK11Q8NG66 645 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 NEK9Q8TD19 979 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.93□□□□□ -0.341e-13■■□□□ 11.9
USF1-208ENST00000528768 CCDC94Q9BW85 323 aaPredicted RBP12.93□□□□□ -0.34
USF1-208ENST00000528768 MOV10L1Q9BXT6 1211 aaKnown RBP12.93□□□□□ -0.34
USF1-208ENST00000528768 TSGA10Q9BZW7 698 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 TANGO6Q9C0B7 1094 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 SPATC1LQ9H0A9 340 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 ZHX3Q9H4I2 956 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 LZTFL1Q9NQ48 299 aa12.93□□□□□ -0.34
USF1-208ENST00000528768 MYH7BA7E2Y1 1941 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 MOXD2PA6NHM9 499 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 KRT86O43790 486 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 MED24O75448 989 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 NDUFA10O95299 355 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 BMP1P13497 986 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 SLC12A3P55017 1021 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 MTF1Q14872 753 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 SPA17Q15506 151 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 ZYXQ15942 572 aaKnown RBP12.92□□□□□ -0.34
USF1-208ENST00000528768 MEA1Q16626 185 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 TMEM31Q5JXX7 168 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 LRCH2Q5VUJ6 765 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 ZNF662Q6ZS27 426 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 KIAA1328Q86T90 577 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 CATSPER3Q86XQ3 398 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 PRPF38AQ8NAV1 312 aaKnown RBP12.92□□□□□ -0.34
USF1-208ENST00000528768 HERVK_113Q902F9 699 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 TSC1Q92574 1164 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 MAML3Q96JK9 1138 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 LRFN3Q9BTN0 628 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 RPAP3Q9H6T3 665 aaPredicted RBP12.92□□□□□ -0.34
USF1-208ENST00000528768 SLC28A3Q9HAS3 691 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 LUC7LQ9NQ29 371 aaKnown RBP12.92□□□□□ -0.34
USF1-208ENST00000528768 CHD9Q3L8U1 2897 aa12.92□□□□□ -0.34
USF1-208ENST00000528768 FRMD3A2A2Y4 597 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 EIF3CLB5ME19 914 aaKnown RBP12.91□□□□□ -0.34
USF1-208ENST00000528768 FAM86B1E9PN63 330 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 USO1O60763 962 aaKnown RBP12.91□□□□□ -0.34
USF1-208ENST00000528768 GAS7O60861 476 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 ICAM1P05362 532 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 FAM86B2P0C5J1 330 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 AKR1A1P14550 325 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 ERCC3P19447 782 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 HOXA13P31271 388 aaPredicted RBP12.91□□□□□ -0.34
USF1-208ENST00000528768 STAT3P40763 770 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 SPIRE1Q08AE8 756 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 PPP2R5CQ13362 524 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 CCDC85BQ15834 202 aaPredicted RBP12.91□□□□□ -0.34
USF1-208ENST00000528768 ECM1Q16610 540 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 MIIPQ5JXC2 388 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 ZNF569Q5MCW4 686 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 TMEM240Q5SV17 173 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 NIPA1Q7RTP0 329 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 CACNA2D4Q7Z3S7 1137 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 HPS3Q969F9 1004 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 CCDC42Q96M95 316 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 NACC1Q96RE7 527 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 EIF3CQ99613 913 aaKnown RBP12.91□□□□□ -0.34
USF1-208ENST00000528768 NAPGQ99747 312 aaPredicted RBP12.91□□□□□ -0.34
USF1-208ENST00000528768 EIF2AK1Q9BQI3 630 aaKnown RBP12.91□□□□□ -0.34
USF1-208ENST00000528768 SLF1Q9BQI6 1058 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 TEKT3Q9BXF9 490 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 MMRN2Q9H8L6 949 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 MRPL44Q9H9J2 332 aaKnown RBP12.91□□□□□ -0.34
USF1-208ENST00000528768 STARD7Q9NQZ5 370 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 KCND2Q9NZV8 630 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 TBX21Q9UL17 535 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 CCPG1Q9ULG6 757 aa12.91□□□□□ -0.34
USF1-208ENST00000528768 DIS3Q9Y2L1 958 aaKnown RBP12.91□□□□□ -0.34
USF1-208ENST00000528768 MYO9BQ13459 2157 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 ZBED4O75132 1171 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 FAM13AO94988 1023 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 SLC25A27O95847 323 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 MARSP56192 900 aaKnown RBP12.9□□□□□ -0.34
USF1-208ENST00000528768 ADGRE1Q14246 886 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms