RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 MAGEB10Q96LZ2 347 aaPredicted RBP6.34□□□□□ -1.39
CLK4-207ENST00000520909 NRDE2Q9H7Z3 1164 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 GPRC5BQ9NZH0 403 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 PPP1R1BQ9UD71 204 aaPredicted RBP6.34□□□□□ -1.39
CLK4-207ENST00000520909 COQ6Q9Y2Z9 468 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 MRPS23Q9Y3D9 190 aaKnown RBP6.34□□□□□ -1.39
CLK4-207ENST00000520909 RBM8AQ9Y5S9 174 aaKnown RBP6.34□□□□□ -1.39
CLK4-207ENST00000520909 PEG3Q9GZU2 1588 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 TOP2AP11388 1531 aaKnown RBP6.34□□□□□ -1.39
CLK4-207ENST00000520909 NCAPD3P42695 1498 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 PCSK5Q92824 1860 aa6.33□□□□□ -1.4
CLK4-207ENST00000520909 CCDC85CA6NKD9 419 aa6.33□□□□□ -1.4
CLK4-207ENST00000520909 BMP5P22003 454 aa6.33□□□□□ -1.4
CLK4-207ENST00000520909 FSTL1Q12841 308 aa6.33□□□□□ -1.4
CLK4-207ENST00000520909 GAREM2Q75VX8 874 aa6.33□□□□□ -1.4
CLK4-207ENST00000520909 RPUSD2Q8IZ73 545 aaKnown RBP6.33□□□□□ -1.4
CLK4-207ENST00000520909 ANKRD53Q8N9V6 530 aa6.33□□□□□ -1.4
CLK4-207ENST00000520909 CELF4Q9BZC1 486 aaKnown RBP6.33□□□□□ -1.4
CLK4-207ENST00000520909 NDOR1Q9UHB4 597 aa6.33□□□□□ -1.4
CLK4-207ENST00000520909 DENND2AQ9ULE3 1009 aa6.33□□□□□ -1.4
CLK4-207ENST00000520909 CC2D2AQ9P2K1 1620 aa6.33□□□□□ -1.4
CLK4-207ENST00000520909 XDHP47989 1333 aa6.32□□□□□ -1.4
CLK4-207ENST00000520909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.32□□□□□ -1.4
CLK4-207ENST00000520909 TRAF5O00463 557 aa6.32□□□□□ -1.4
CLK4-207ENST00000520909 DIAPH1O60610 1272 aaKnown RBP6.32□□□□□ -1.4
CLK4-207ENST00000520909 BPIFB4P59827 614 aa6.32□□□□□ -1.4
CLK4-207ENST00000520909 ALDH6A1Q02252 535 aaKnown RBP6.32□□□□□ -1.4
CLK4-207ENST00000520909 TOB2Q14106 344 aaPredicted RBP6.32□□□□□ -1.4
CLK4-207ENST00000520909 ELAVL1Q15717 326 aaKnown RBP6.32□□□□□ -1.4
CLK4-207ENST00000520909 CATSPEREQ5SY80 951 aa6.32□□□□□ -1.4
CLK4-207ENST00000520909 OVCH1Q7RTY7 1134 aa6.32□□□□□ -1.4
CLK4-207ENST00000520909 GPR87Q9BY21 358 aa6.32□□□□□ -1.4
CLK4-207ENST00000520909 SLC52A2Q9HAB3 445 aa6.32□□□□□ -1.4
CLK4-207ENST00000520909 C2orf78A6NCI8 922 aa6.31□□□□□ -1.4
CLK4-207ENST00000520909 SMAD3P84022 425 aaKnown RBP6.31□□□□□ -1.4
CLK4-207ENST00000520909 ZC3H12BQ5HYM0 836 aaKnown RBP6.31□□□□□ -1.4
CLK4-207ENST00000520909 FSTL4Q6MZW2 842 aa6.31□□□□□ -1.4
CLK4-207ENST00000520909 C2orf69Q8N8R5 385 aa6.31□□□□□ -1.4
CLK4-207ENST00000520909 E2F7Q96AV8 911 aa6.31□□□□□ -1.4
CLK4-207ENST00000520909 GPHA2Q96T91 129 aa6.31□□□□□ -1.4
CLK4-207ENST00000520909 FOXB1Q99853 325 aa6.31□□□□□ -1.4
CLK4-207ENST00000520909 TCF25Q9BQ70 676 aa6.31□□□□□ -1.4
CLK4-207ENST00000520909 MAGEL2Q9UJ55 1249 aa6.31□□□□□ -1.4
CLK4-207ENST00000520909 CCDC88BA6NC98 1476 aa6.3□□□□□ -1.4
CLK4-207ENST00000520909 UBE2QL1A1L167 161 aa6.3□□□□□ -1.4
CLK4-207ENST00000520909 HNRNPA0Q13151 305 aaKnown RBP6.3□□□□□ -1.4
CLK4-207ENST00000520909 TCIRG1Q13488 830 aa6.3□□□□□ -1.4
CLK4-207ENST00000520909 MRGPREQ86SM8 312 aa6.3□□□□□ -1.4
CLK4-207ENST00000520909 KDM2BQ8NHM5 1336 aa6.3□□□□□ -1.4
CLK4-207ENST00000520909 FAM20BO75063 409 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 MFAP3LO75121 409 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 RHOBTB3O94955 611 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 RASGRP1O95267 797 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 NPTXRO95502 500 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 GCP02774 474 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 IRF9Q00978 393 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 COL10A1Q03692 680 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 DGKDQ16760 1214 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 GAGE13Q4V321 117 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 RTN4RL1Q86UN2 441 aaPredicted RBP6.29□□□□□ -1.4
CLK4-207ENST00000520909 GSTCDQ8NEC7 633 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 SLC25A43Q8WUT9 341 aaPredicted RBP6.29□□□□□ -1.4
CLK4-207ENST00000520909 FOXRED1Q96CU9 486 aaPredicted RBP6.29□□□□□ -1.4
CLK4-207ENST00000520909 RCAN3Q9UKA8 241 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 TNFRSF18Q9Y5U5 241 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 HMGXB3Q12766 1538 aa6.29□□□□□ -1.4
CLK4-207ENST00000520909 GOLGA6L6A8MZA4 724 aa6.28□□□□□ -1.4
CLK4-207ENST00000520909 ROM1Q03395 351 aa6.28□□□□□ -1.4
CLK4-207ENST00000520909 RABL3Q5HYI8 236 aa6.28□□□□□ -1.4
CLK4-207ENST00000520909 FKBP15Q5T1M5 1219 aa6.28□□□□□ -1.4
CLK4-207ENST00000520909 MFSD5Q6N075 450 aa6.28□□□□□ -1.4
CLK4-207ENST00000520909 CC2D1AQ6P1N0 951 aaPredicted RBP6.28□□□□□ -1.4
CLK4-207ENST00000520909 HOMEZQ8IX15 550 aa6.28□□□□□ -1.4
CLK4-207ENST00000520909 IL23AQ9NPF7 189 aa6.28□□□□□ -1.4
CLK4-207ENST00000520909 SIRPGQ9P1W8 387 aa6.28□□□□□ -1.4
CLK4-207ENST00000520909 ANTXR2P58335 489 aa6.27□□□□□ -1.41
CLK4-207ENST00000520909 NBPF6Q5VWK0 638 aa6.27□□□□□ -1.41
CLK4-207ENST00000520909 MBNL2Q5VZF2 373 aaKnown RBP6.27□□□□□ -1.41
CLK4-207ENST00000520909 KRT40Q6A162 431 aa6.27□□□□□ -1.41
CLK4-207ENST00000520909 SYNE4Q8N205 404 aa6.27□□□□□ -1.41
CLK4-207ENST00000520909 ZNF276Q8N554 614 aa6.27□□□□□ -1.41
CLK4-207ENST00000520909 PLA2G15Q8NCC3 412 aa6.27□□□□□ -1.41
CLK4-207ENST00000520909 SLC7A14Q8TBB6 771 aa6.27□□□□□ -1.41
CLK4-207ENST00000520909 ATXN2LQ8WWM7 1075 aaKnown RBP6.27□□□□□ -1.41
CLK4-207ENST00000520909 NBPF4Q96M43 638 aa6.27□□□□□ -1.41
CLK4-207ENST00000520909 MNTQ99583 582 aa6.27□□□□□ -1.41
CLK4-207ENST00000520909 DAPK3O43293 454 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 ZBTB48P10074 688 aaPredicted RBP6.26□□□□□ -1.41
CLK4-207ENST00000520909 ADRA1BP35368 520 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 RGS3P49796 1198 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 RABGGTBP53611 331 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 ADAM8P78325 824 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 SLC6A3Q01959 620 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 ARHGAP44Q17R89 818 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 TMEM177Q53S58 311 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 ELOA2Q8IYF1 753 aaPredicted RBP6.26□□□□□ -1.41
CLK4-207ENST00000520909 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 OR5AN1Q8NGI8 311 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 NKD2Q969F2 451 aaPredicted RBP6.26□□□□□ -1.41
CLK4-207ENST00000520909 VOPP1Q96AW1 172 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms