RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 GAP43P17677 238 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 AFMP43652 599 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 SARSP49591 514 aaKnown RBP13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 DNM2P50570 870 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 POU5F1BQ06416 359 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 RBL2Q08999 1139 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 PTK7Q13308 1070 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 MXD4Q14582 209 aaPredicted RBP13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 KCNB1Q14721 858 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 TPRNQ4KMQ1 711 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 CCDC183Q5T5S1 534 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 GDF6Q6KF10 455 aaPredicted RBP13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 SLC39A5Q6ZMH5 540 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 UNC13DQ70J99 1090 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 NECAB2Q7Z6G3 386 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 DAW1Q8N136 415 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 NME8Q8N427 588 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 TRAPPC12Q8WVT3 735 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 VTI1AQ96AJ9 217 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 GTPBP4Q9BZE4 634 aaKnown RBP13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 C11orf49Q9H6J7 331 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 SEL1LQ9UBV2 794 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 COL4A3BPQ9Y5P4 624 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 ALPK3Q96L96 1907 aa13.28□□□□□ -0.28
PDLIM5-220ENST00000514830 KLRC4O43908 158 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 TRAK2O60296 914 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 SMC2O95347 1197 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 CD4P01730 458 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 MAPTP10636 758 aaKnown RBP13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 CUL4BQ13620 913 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 EFCAB12Q6NXP0 572 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 TRMT1LQ7Z2T5 733 aaKnown RBP13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 FAM126BQ8IXS8 530 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 KIAA0319LQ8IZA0 1049 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 SLC17A8Q8NDX2 589 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 SPIRE2Q8WWL2 714 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 STAMQ92783 540 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 SH2D3AQ9BRG2 576 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 NTPCRQ9BSD7 190 aaKnown RBP13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 SENP6Q9GZR1 1112 aaPredicted RBP13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 OLFML3Q9NRN5 406 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 TANC1Q9C0D5 1861 aa13.27□□□□□ -0.29
PDLIM5-220ENST00000514830 TREHO43280 583 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 HIP1RO75146 1068 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 RHOBTB3O94955 611 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PRR29P0C7W0 189 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 CYP2C9P11712 490 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PLS3P13797 630 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 ABCD1P33897 745 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 IGBP1P78318 339 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 ASIC1P78348 528 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PSMD2Q13200 908 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PNOCQ13519 176 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PPP2R5AQ15172 486 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PTGISQ16647 500 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 FAM47CQ5HY64 1035 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 CCDC65Q8IXS2 484 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 GRAMD1CQ8IYS0 662 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 TRIML1Q8N9V2 468 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 DIS3LQ8TF46 1054 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PSPC1Q8WXF1 523 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PAWRQ96IZ0 340 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 NFKBIZQ9BYH8 718 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 ST6GALNAC4Q9H4F1 302 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PARVGQ9HBI0 331 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 RMND1Q9NWS8 449 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 TMEM63CQ9P1W3 806 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 KIAA1468Q9P260 1216 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 LARSQ9P2J5 1176 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PCDHA5Q9Y5H7 936 aa13.26□□□□□ -0.29
PDLIM5-220ENST00000514830 PHLPP2Q6ZVD8 1323 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 NPHP3-ACAD11A0A0J9YXS1 232 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 B4GALT4O60513 344 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 TBCAO75347 108 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 LETM1O95202 739 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 RPN1P04843 607 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 KRT18P05783 430 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 NAMPTP43490 491 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 CHMP4BP1P59074 171 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 TRIM71Q2Q1W2 868 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 FAM43BQ6ZT52 329 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 DYMQ7RTS9 669 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 ZNF410Q86VK4 478 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 PRPF31Q8WWY3 499 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 CCDC47Q96A33 483 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 FIZ1Q96SL8 496 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 MAP7D2Q96T17 732 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 POLR3FQ9H1D9 316 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 BLZF1Q9H2G9 400 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 SUGCTQ9HAC7 445 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 PANK4Q9NVE7 773 aa13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 SUCLA2Q9P2R7 463 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-220ENST00000514830 RSPH10B2B2RC85 870 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 H0YCG3 227 aa13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 TLR3O15455 904 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-220ENST00000514830 FAM13AO94988 1023 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms