RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 HAUS6Q7Z4H7 955 aa9.19□□□□□ -0.94
RNF4-220ENST00000513578 ZNF467Q7Z7K2 595 aaPredicted RBP9.19□□□□□ -0.94
RNF4-220ENST00000513578 CCDC60Q8IWA6 550 aaPredicted RBP9.19□□□□□ -0.94
RNF4-220ENST00000513578 C2orf69Q8N8R5 385 aa9.19□□□□□ -0.94
RNF4-220ENST00000513578 GPRC5AQ8NFJ5 357 aa9.19□□□□□ -0.94
RNF4-220ENST00000513578 MYRIPQ8NFW9 859 aa9.19□□□□□ -0.94
RNF4-220ENST00000513578 KIF18AQ8NI77 898 aa9.19□□□□□ -0.94
RNF4-220ENST00000513578 C16orf45Q96MC5 204 aaPredicted RBP9.19□□□□□ -0.94
RNF4-220ENST00000513578 CCDC43Q96MW1 224 aaKnown RBP9.19□□□□□ -0.94
RNF4-220ENST00000513578 BCAS3Q9H6U6 928 aa9.19□□□□□ -0.94
RNF4-220ENST00000513578 ZCCHC17Q9NP64 241 aaKnown RBP9.19□□□□□ -0.94
RNF4-220ENST00000513578 AGPAT3Q9NRZ7 376 aa9.19□□□□□ -0.94
RNF4-220ENST00000513578 ZNHIT6Q9NWK9 470 aaKnown RBP9.19□□□□□ -0.94
RNF4-220ENST00000513578 TRMT1Q9NXH9 659 aaKnown RBP9.19□□□□□ -0.94
RNF4-220ENST00000513578 CEP72Q9P209 647 aa9.19□□□□□ -0.94
RNF4-220ENST00000513578 MYO6Q9UM54 1294 aa9.19□□□□□ -0.94
RNF4-220ENST00000513578 EPN1Q9Y6I3 576 aaPredicted RBP9.19□□□□□ -0.94
RNF4-220ENST00000513578 PHLPP2Q6ZVD8 1323 aa9.19□□□□□ -0.94
RNF4-220ENST00000513578 GSTTP1A0A1W2PQM5 241 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 RBM47A0AV96 593 aaKnown RBP9.18□□□□□ -0.94
RNF4-220ENST00000513578 SOWAHDA6NJG2 315 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 EIF3CLB5ME19 914 aaKnown RBP9.18□□□□□ -0.94
RNF4-220ENST00000513578 K7ENM7 598 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 PES1O00541 588 aaKnown RBP9.18□□□□□ -0.94
RNF4-220ENST00000513578 PMM2O15305 246 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 USO1O60763 962 aaKnown RBP9.18□□□□□ -0.94
RNF4-220ENST00000513578 LGR5O75473 907 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 LCA5LO95447 670 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 POTEJP0CG39 1038 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 XRCC5P13010 732 aaKnown RBP9.18□□□□□ -0.94
RNF4-220ENST00000513578 UBA1P22314 1058 aaKnown RBP9.18□□□□□ -0.94
RNF4-220ENST00000513578 RFC5P40937 340 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 SMTNP53814 917 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 KCNA1Q09470 495 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 KCNH2Q12809 1159 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 FSTL1Q12841 308 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 ZC2HC1CQ53FD0 456 aaPredicted RBP9.18□□□□□ -0.94
RNF4-220ENST00000513578 FAM160B1Q5W0V3 765 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 SPRYD7Q5W111 196 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 DPY19L2P1Q6NXN4 242 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 TOGARAM2Q6ZUX3 1019 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 NEK11Q8NG66 645 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 SEPT1Q8WYJ6 367 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 BAP1Q92560 729 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 SLC35C1Q96A29 364 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 EEF2KMTQ96G04 330 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 CEP170P1Q96L14 293 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 CEP89Q96ST8 783 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 EIF3CQ99613 913 aaKnown RBP9.18□□□□□ -0.94
RNF4-220ENST00000513578 ZNF302Q9NR11 478 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 CYP26B1Q9NR63 512 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 AGPAT5Q9NUQ2 364 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 MYO1AQ9UBC5 1043 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 DDX41Q9UJV9 622 aaKnown RBP9.18□□□□□ -0.94
RNF4-220ENST00000513578 EXOC7Q9UPT5 735 aa9.18□□□□□ -0.94
RNF4-220ENST00000513578 DIS3Q9Y2L1 958 aaKnown RBP9.18□□□□□ -0.94
RNF4-220ENST00000513578 CCL15-CCL14A0A0B4J2E2 113 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 SSU72P8A0A1W2PR75 194 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 BTBD19C9JJ37 291 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 PDHXO00330 501 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 P4HA2O15460 535 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 PEX10O60683 326 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 NOL4O94818 638 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 TOMM70O94826 608 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 NDUFA10O95299 355 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 OATP04181 439 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 ATP4AP20648 1035 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 CYLC1P35663 651 aaPredicted RBP9.17□□□□□ -0.94
RNF4-220ENST00000513578 KLK7P49862 253 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 SLC26A2P50443 739 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 NPEPPSP55786 919 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 KRT83P78385 493 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 PRKCEQ02156 737 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 IRF5Q13568 498 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 MTF1Q14872 753 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 TARBP2Q15633 366 aaKnown RBP9.17□□□□□ -0.94
RNF4-220ENST00000513578 CCL15Q16663 113 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 ZNF792Q3KQV3 632 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 PDXDC1Q6P996 788 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 CCDC62Q6P9F0 684 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 SEPT14Q6ZU15 432 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 CYFIP1Q7L576 1253 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 PLPPR4Q7Z2D5 763 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 MAP4K3Q8IVH8 894 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 EXOC8Q8IYI6 725 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 FAM186BQ8IYM0 893 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 TMEM161BQ8NDZ6 487 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 BRI3BPQ8WY22 251 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 FAM167AQ96KS9 214 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 PCMTD1Q96MG8 357 aaPredicted RBP9.17□□□□□ -0.94
RNF4-220ENST00000513578 CHP1Q99653 195 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 DHX33Q9H6R0 707 aaKnown RBP9.17□□□□□ -0.94
RNF4-220ENST00000513578 MMRN2Q9H8L6 949 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 L2HGDHQ9H9P8 463 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 RRAGCQ9HB90 399 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 ATP6V0A4Q9HBG4 840 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 XPNPEP1Q9NQW7 623 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 NRBP2Q9NSY0 501 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 USP20Q9Y2K6 914 aa9.17□□□□□ -0.94
RNF4-220ENST00000513578 FRMD4BQ9Y2L6 1034 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms