RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 SRLQ86TD4 932 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 NLRP14Q86W24 1093 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 DDX42Q86XP3 938 aaKnown RBP eCLIP8.66□□□□□ -1.02
NEK1-208ENST00000512193 MAP7D3Q8IWC1 876 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 ELOA2Q8IYF1 753 aaPredicted RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.66□□□□□ -1.02
NEK1-208ENST00000512193 RFFLQ8WZ73 363 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 RNF25Q96BH1 459 aaPredicted RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 RNPC3Q96LT9 517 aaKnown RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 CFAP57Q96MR6 1250 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 RIOK1Q9BRS2 568 aaKnown RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 LXNQ9BS40 222 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 APOL6Q9BWW8 343 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 VCXQ9H320 206 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 RAVER2Q9HCJ3 691 aaKnown RBP8.66□□□□□ -1.02
NEK1-208ENST00000512193 PNMA2Q9UL42 364 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 HPCAL4Q9UM19 191 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 PXDNQ92626 1479 aa8.66□□□□□ -1.02
NEK1-208ENST00000512193 PDS5AQ29RF7 1337 aaKnown RBP8.65□□□□□ -1.02
NEK1-208ENST00000512193 GRID2IPA4D2P6 1211 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 TFRCP02786 760 aaKnown RBP8.65□□□□□ -1.02
NEK1-208ENST00000512193 PMS2P54278 862 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 PDE1BQ01064 536 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 MKRN4PQ13434 485 aaPredicted RBP8.65□□□□□ -1.02
NEK1-208ENST00000512193 ALCAMQ13740 583 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 LRRC14Q15048 493 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 ADGRA1Q86SQ6 560 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 NME8Q8N427 588 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 C7orf31Q8N865 590 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 OR2W6PQ8NHA6 318 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 TBC1D16Q8TBP0 767 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 MASTLQ96GX5 879 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 PPP1R16BQ96T49 567 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 FAM213AQ9BRX8 229 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 VCX3BQ9H321 246 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 DENND3A2RUS2 1198 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 PDXKO00764 312 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 TTI1O43156 1089 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 MT-ND3P03897 115 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 SOX5P35711 763 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 PHLDB3Q6NSJ2 640 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 RNF207Q6ZRF8 634 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 KRT27Q7Z3Y8 459 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 FRMD5Q7Z6J6 570 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 THNSL1Q8IYQ7 743 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 RNF169Q8NCN4 708 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 ZNF564Q8TBZ8 553 aaPredicted RBP8.65□□□□□ -1.02
NEK1-208ENST00000512193 REEP2Q9BRK0 252 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 SAYSD1Q9NPB0 183 aa8.65□□□□□ -1.02
NEK1-208ENST00000512193 PPP1R37O75864 691 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 ZNF18P17022 549 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 CA8P35219 290 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 ACTN3Q08043 901 aaPredicted RBP8.65□□□□□ -1.03
NEK1-208ENST00000512193 ICE2Q659A1 982 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 PPP4R1Q8TF05 950 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 C1orf54Q8WWF1 131 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 ERGIC2Q96RQ1 377 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 MSTO1Q9BUK6 570 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 NUP85Q9BW27 656 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 VIPAS39Q9H9C1 493 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 FAM217BQ9NTX9 383 aaPredicted RBP8.65□□□□□ -1.03
NEK1-208ENST00000512193 PLAGL2Q9UPG8 496 aa8.65□□□□□ -1.03
NEK1-208ENST00000512193 MCF2LO15068 1137 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 FGFR2P21802 821 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 MARK3P27448 753 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 QARSP47897 775 aaKnown RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 SLC12A2P55011 1212 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 FAM160B1Q5W0V3 765 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 MIS18BP1Q6P0N0 1132 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 TMEM270Q6UE05 265 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 TRIM59Q8IWR1 403 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 PYROXD1Q8WU10 500 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 CDHR1Q96JP9 859 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 TRIM51Q9BSJ1 452 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 PITPNM3Q9BZ71 974 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 RASA4BC9J798 803 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 RASA4O43374 803 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 EVI5O60447 810 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 EYA4O95677 639 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 NDUFB10O96000 172 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 PKN1Q16512 942 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 CEP55Q53EZ4 464 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 DARS2Q6PI48 645 aaKnown RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 TRIM65Q6PJ69 517 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 CCDC137Q6PK04 289 aaKnown RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 TXNRD3Q86VQ6 643 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 LINC00116Q8NCU8 138 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 SLITRK6Q9H5Y7 841 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 ZWILCHQ9H900 591 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 SEL1LQ9UBV2 794 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 L1RE1Q9UN81 338 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 NOD1Q9Y239 953 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 MEGF6O75095 1541 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 VWDEQ8N2E2 1590 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 ECE2O60344 883 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 P4HBP07237 508 aaKnown RBP8.64□□□□□ -1.03
NEK1-208ENST00000512193 PSAPP07602 524 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 MYBP10242 640 aa8.64□□□□□ -1.03
NEK1-208ENST00000512193 IRAK1P51617 712 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms