RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 SLC10A5Q5PT55 438 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 DCAF15Q66K64 600 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 POTEEQ6S8J3 1075 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 DCAF4Q8WV16 495 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 HOOK2Q96ED9 719 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 TSKSQ9UJT2 592 aa11.65□□□□□ -0.54
CPNE4-209ENST00000512055 TTC26A0AVF1 554 aa11.65□□□□□ -0.55
CPNE4-209ENST00000512055 H2AFZP0C0S5 128 aa11.65□□□□□ -0.55
CPNE4-209ENST00000512055 EIF2AK2P19525 551 aaKnown RBP11.65□□□□□ -0.55
CPNE4-209ENST00000512055 DPYDQ12882 1025 aa11.65□□□□□ -0.55
CPNE4-209ENST00000512055 H2AFVQ71UI9 128 aa11.65□□□□□ -0.55
CPNE4-209ENST00000512055 RAD54LQ92698 747 aa11.65□□□□□ -0.55
CPNE4-209ENST00000512055 P3H4Q92791 437 aa11.65□□□□□ -0.55
CPNE4-209ENST00000512055 GLG1Q92896 1179 aa11.65□□□□□ -0.55
CPNE4-209ENST00000512055 IRX2Q9BZI1 471 aaPredicted RBP11.65□□□□□ -0.55
CPNE4-209ENST00000512055 PACSIN2Q9UNF0 486 aaPredicted RBP11.65□□□□□ -0.55
CPNE4-209ENST00000512055 AFPP02771 609 aaKnown RBP11.64□□□□□ -0.55
CPNE4-209ENST00000512055 TCP1P17987 556 aaKnown RBP11.64□□□□□ -0.55
CPNE4-209ENST00000512055 CLCN6P51797 869 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 SLC12A2P55011 1212 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 UBE3AQ05086 875 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 LRRC63Q05C16 580 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 SEC23AQ15436 765 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 DTNBP1Q96EV8 351 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 PARD6BQ9BYG5 372 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 AZI2Q9H6S1 392 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 AS3MTQ9HBK9 375 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 CD2APQ9Y5K6 639 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 STXBP3O00186 592 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 LRRN2O75325 713 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 RCSD1Q6JBY9 416 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 CDC42EP5Q6NZY7 148 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 CAPN12Q6ZSI9 719 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 TADA2BQ86TJ2 420 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 EFHD1Q9BUP0 239 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 EPC1Q9H2F5 836 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 USTQ9Y2C2 406 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 MAD1L1Q9Y6D9 718 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 MSH2P43246 934 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 CUL3Q13618 768 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 SLC30A9Q6PML9 568 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 OSBPL1AQ9BXW6 950 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 WDR11Q9BZH6 1224 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 INTS9Q9NV88 658 aaKnown RBP11.64□□□□□ -0.55
CPNE4-209ENST00000512055 KIF11P52732 1056 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 NACC1Q96RE7 527 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 AMFRQ9UKV5 643 aa11.64□□□□□ -0.55
CPNE4-209ENST00000512055 TADA3O75528 432 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 KRT7P08729 469 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 KRT4P19013 534 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 DMPKQ09013 629 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 ASPHQ12797 758 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 ACBD5Q5T8D3 534 aaPredicted RBP11.63□□□□□ -0.55
CPNE4-209ENST00000512055 NAA35Q5VZE5 725 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 RBM43Q6ZSC3 357 aaKnown RBP11.63□□□□□ -0.55
CPNE4-209ENST00000512055 ARHGAP27Q6ZUM4 889 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 ACTR5Q9H9F9 607 aaPredicted RBP11.63□□□□□ -0.55
CPNE4-209ENST00000512055 C6orf203Q9P0P8 240 aaPredicted RBP11.63□□□□□ -0.55
CPNE4-209ENST00000512055 FMN2Q9NZ56 1722 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 FTCDO95954 541 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 PDHBP11177 359 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 ZNF543Q08ER8 600 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 ADCK1Q86TW2 530 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 SYCE1Q8N0S2 351 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 DCLK2Q8N568 766 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 TEX9Q8N6V9 391 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
CPNE4-209ENST00000512055 POLLQ9UGP5 575 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 ADAMTS1Q9UHI8 967 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 ADGRG1Q9Y653 693 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 GPR75-ASB3A0A0A6YYF3 556 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 GSTA1P08263 222 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 GSTA2P09210 222 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 PSMC2P35998 433 aaKnown RBP11.63□□□□□ -0.55
CPNE4-209ENST00000512055 MRPS25P82663 173 aaKnown RBP11.63□□□□□ -0.55
CPNE4-209ENST00000512055 COASYQ13057 564 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 PTF1AQ7RTS3 328 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 SFR1Q86XK3 245 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 DEPTORQ8TB45 409 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 TRIM9Q9C026 710 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 PARVGQ9HBI0 331 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 SYTL2Q9HCH5 934 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 GPC4O75487 556 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 AP3B2Q13367 1082 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 LONRF2Q1L5Z9 754 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 BSPRYQ5W0U4 402 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 OLFML2BQ68BL8 750 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 ANKRD40Q6AI12 368 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 ARL10Q8N8L6 244 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 GABPB2Q8TAK5 448 aaPredicted RBP11.63□□□□□ -0.55
CPNE4-209ENST00000512055 KCNV2Q8TDN2 545 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 RAB17Q9H0T7 212 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 SUGCTQ9HAC7 445 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 GCNT4Q9P109 453 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 CSADQ9Y600 493 aa11.63□□□□□ -0.55
CPNE4-209ENST00000512055 A0A1B0GW55 424 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 DUX4L2P0CJ85 424 aa11.62□□□□□ -0.55
CPNE4-209ENST00000512055 DUX4L3P0CJ86 424 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms