RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 SYNE4Q8N205 404 aa4.98□□□□□ -1.61
GYPB-209ENST00000508618 CISD2Q8N5K1 135 aaKnown RBP4.98□□□□□ -1.61
GYPB-209ENST00000508618 THAP3Q8WTV1 239 aaPredicted RBP4.98□□□□□ -1.61
GYPB-209ENST00000508618 GCDHQ92947 438 aaPredicted RBP4.98□□□□□ -1.61
GYPB-209ENST00000508618 NKD2Q969F2 451 aaPredicted RBP4.98□□□□□ -1.61
GYPB-209ENST00000508618 E2F7Q96AV8 911 aa4.98□□□□□ -1.61
GYPB-209ENST00000508618 IPO9Q96P70 1041 aaKnown RBP4.98□□□□□ -1.61
GYPB-209ENST00000508618 IL23AQ9NPF7 189 aa4.98□□□□□ -1.61
GYPB-209ENST00000508618 SAE1Q9UBE0 346 aaPredicted RBP4.98□□□□□ -1.61
GYPB-209ENST00000508618 FZD1Q9UP38 647 aa4.98□□□□□ -1.61
GYPB-209ENST00000508618 XDHP47989 1333 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 GRID2IPA4D2P6 1211 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 GRXCR1A8MXD5 290 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 EFCAB14O75071 495 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 IPO13O94829 963 aaKnown RBP4.97□□□□□ -1.61
GYPB-209ENST00000508618 ITGB1P05556 798 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 TCF3P15923 654 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 STAT3P40763 770 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 IL12RB1P42701 662 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 FNTBP49356 437 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 BPIFB4P59827 614 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 FSTL1Q12841 308 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 TCIRG1Q13488 830 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 DCAF17Q5H9S7 520 aaPredicted RBP4.97□□□□□ -1.61
GYPB-209ENST00000508618 C1QL3Q5VWW1 255 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 SPATC1Q76KD6 591 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 ZNF276Q8N554 614 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 GSTCDQ8NEC7 633 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 FOXRED1Q96CU9 486 aaPredicted RBP4.97□□□□□ -1.61
GYPB-209ENST00000508618 DENND2AQ9ULE3 1009 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 HS3ST4Q9Y661 456 aa4.97□□□□□ -1.61
GYPB-209ENST00000508618 PDPK1O15530 556 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 HIP1RO75146 1068 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 RPS6KA4O75676 772 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 APPP05067 770 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 VSIG10L2P0DP72 767 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 MRPS21P82921 87 aaKnown RBP4.96□□□□□ -1.62
GYPB-209ENST00000508618 DGKDQ16760 1214 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 ZC3H12BQ5HYM0 836 aaKnown RBP4.96□□□□□ -1.62
GYPB-209ENST00000508618 FAM209AQ5JX71 171 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 LY6G5CQ5SRR4 150 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 FKBP15Q5T1M5 1219 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 ANKRD53Q8N9V6 530 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 MDGA1Q8NFP4 955 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 EXOC2Q96KP1 924 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 TCF25Q9BQ70 676 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 TRIM55Q9BYV6 548 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 HAPLN2Q9GZV7 340 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 TOR3AQ9H497 397 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 PCDHA9Q9Y5H5 950 aa4.96□□□□□ -1.62
GYPB-209ENST00000508618 A0A0A6YYK5 440 aaPredicted RBP4.95□□□□□ -1.62
GYPB-209ENST00000508618 SLC12A8A0AV02 714 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 UBE2QL1A1L167 161 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 C2orf78A6NCI8 922 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 NPTXRO95502 500 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 NUDT3O95989 172 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 PRLP01236 227 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 MTERF2Q49AM1 385 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 TRIM61Q5EBN2 209 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 FOXB2Q5VYV0 432 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 CC2D1AQ6P1N0 951 aaPredicted RBP4.95□□□□□ -1.62
GYPB-209ENST00000508618 SYCE2Q6PIF2 218 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 OVCH1Q7RTY7 1134 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 CLEC14AQ86T13 490 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 MNTQ99583 582 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 DHRS4Q9BTZ2 278 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 MLST8Q9BVC4 326 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 PTGFRNQ9P2B2 879 aa4.95□□□□□ -1.62
GYPB-209ENST00000508618 MRPS23Q9Y3D9 190 aaKnown RBP4.95□□□□□ -1.62
GYPB-209ENST00000508618 RBM8AQ9Y5S9 174 aaKnown RBP4.95□□□□□ -1.62
GYPB-209ENST00000508618 TRIM24O15164 1050 aa4.94□□□□□ -1.62
GYPB-209ENST00000508618 MTSS1O43312 755 aa4.94□□□□□ -1.62
GYPB-209ENST00000508618 B3GALT2O43825 422 aa4.94□□□□□ -1.62
GYPB-209ENST00000508618 ABHD16AO95870 558 aa4.94□□□□□ -1.62
GYPB-209ENST00000508618 JUNP05412 331 aaKnown RBP4.94□□□□□ -1.62
GYPB-209ENST00000508618 ROM1Q03395 351 aa4.94□□□□□ -1.62
GYPB-209ENST00000508618 SSRP1Q08945 709 aaKnown RBP4.94□□□□□ -1.62
GYPB-209ENST00000508618 PTPAQ15257 358 aa4.94□□□□□ -1.62
GYPB-209ENST00000508618 OTOP1Q7RTM1 612 aa4.94□□□□□ -1.62
GYPB-209ENST00000508618 PROKR1Q8TCW9 393 aa4.94□□□□□ -1.62
GYPB-209ENST00000508618 NTN5Q8WTR8 489 aaPredicted RBP4.94□□□□□ -1.62
GYPB-209ENST00000508618 RPL10LQ96L21 214 aaKnown RBP4.94□□□□□ -1.62
GYPB-209ENST00000508618 CCDC113Q9H0I3 377 aa4.94□□□□□ -1.62
GYPB-209ENST00000508618 POLR3BQ9NW08 1133 aaPredicted RBP4.94□□□□□ -1.62
GYPB-209ENST00000508618 KCMF1Q9P0J7 381 aa4.94□□□□□ -1.62
GYPB-209ENST00000508618 ZAR1LA6NP61 321 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 FAM20BO75063 409 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 C21orf58P58505 322 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 TAP1Q03518 808 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 CSRP2Q16527 193 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 NBPF6Q5VWK0 638 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 KCNV1Q6PIU1 500 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 BMP8AQ7Z5Y6 402 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 GPR150Q8NGU9 434 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 ATXN2LQ8WWM7 1075 aaKnown RBP4.93□□□□□ -1.62
GYPB-209ENST00000508618 NBPF4Q96M43 638 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 BBC3Q96PG8 261 aaPredicted RBP4.93□□□□□ -1.62
GYPB-209ENST00000508618 RIOX1Q9H6W3 641 aa4.93□□□□□ -1.62
GYPB-209ENST00000508618 C14orf93Q9H972 538 aaKnown RBP4.93□□□□□ -1.62
GYPB-209ENST00000508618 SLC52A2Q9HAB3 445 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms