RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 AGO3Q9H9G7 860 aaKnown RBP27.95■■■□□ 2.06
LSM6-202ENST00000502781 TSHZ2Q9NRE2 1034 aa27.95■■■□□ 2.06
LSM6-202ENST00000502781 BMP2KQ9NSY1 1161 aaPredicted RBP27.95■■■□□ 2.06
LSM6-202ENST00000502781 CIZ1Q9ULV3 898 aaPredicted RBP27.95■■■□□ 2.06
LSM6-202ENST00000502781 ARHGEF35A5YM69 484 aa27.94■■■□□ 2.06
LSM6-202ENST00000502781 USO1O60763 962 aaKnown RBP27.94■■■□□ 2.06
LSM6-202ENST00000502781 CYP11B2P19099 503 aa27.94■■■□□ 2.06
LSM6-202ENST00000502781 KARSQ15046 597 aaKnown RBP27.94■■■□□ 2.06
LSM6-202ENST00000502781 ZRSR1Q15695 479 aaKnown RBP27.94■■■□□ 2.06
LSM6-202ENST00000502781 AXDND1Q5T1B0 1012 aaPredicted RBP27.94■■■□□ 2.06
LSM6-202ENST00000502781 OTOP2Q7RTS6 562 aa27.94■■■□□ 2.06
LSM6-202ENST00000502781 LRRC15Q8TF66 581 aa27.94■■■□□ 2.06
LSM6-202ENST00000502781 PSPC1Q8WXF1 523 aaKnown RBP27.94■■■□□ 2.06
LSM6-202ENST00000502781 SEPT8Q92599 483 aa27.94■■■□□ 2.06
LSM6-202ENST00000502781 CALML4Q96GE6 196 aa27.94■■■□□ 2.06
LSM6-202ENST00000502781 CDK5RAP3Q96JB5 506 aa27.94■■■□□ 2.06
LSM6-202ENST00000502781 IFIH1Q9BYX4 1025 aaKnown RBP27.94■■■□□ 2.06
LSM6-202ENST00000502781 RBM19Q9Y4C8 960 aaKnown RBP27.94■■■□□ 2.06
LSM6-202ENST00000502781 BAIAP3O94812 1187 aa27.93■■■□□ 2.06
LSM6-202ENST00000502781 ACTN1P12814 892 aa27.93■■■□□ 2.06
LSM6-202ENST00000502781 ARL2P36404 184 aa27.93■■■□□ 2.06
LSM6-202ENST00000502781 KRT85P78386 507 aa27.93■■■□□ 2.06
LSM6-202ENST00000502781 ZNF410Q86VK4 478 aa27.93■■■□□ 2.06
LSM6-202ENST00000502781 MCPH1Q8NEM0 835 aa27.93■■■□□ 2.06
LSM6-202ENST00000502781 PRPF31Q8WWY3 499 aaKnown RBP27.93■■■□□ 2.06
LSM6-202ENST00000502781 RNPC3Q96LT9 517 aaKnown RBP27.93■■■□□ 2.06
LSM6-202ENST00000502781 PPP1R16BQ96T49 567 aa27.93■■■□□ 2.06
LSM6-202ENST00000502781 OSMRQ99650 979 aa27.93■■■□□ 2.06
LSM6-202ENST00000502781 CXXC1Q9P0U4 656 aaPredicted RBP27.93■■■□□ 2.06
LSM6-202ENST00000502781 GINS2Q9Y248 185 aa27.93■■■□□ 2.06
LSM6-202ENST00000502781 CUTAO60888 179 aa27.92■■■□□ 2.06
LSM6-202ENST00000502781 RHPN2Q8IUC4 686 aa27.92■■■□□ 2.06
LSM6-202ENST00000502781 APBB2Q92870 758 aa27.92■■■□□ 2.06
LSM6-202ENST00000502781 PLIN2Q99541 437 aa27.92■■■□□ 2.06
LSM6-202ENST00000502781 BLOC1S4Q9NUP1 217 aa27.92■■■□□ 2.06
LSM6-202ENST00000502781 COL4A3BPQ9Y5P4 624 aa27.92■■■□□ 2.06
LSM6-202ENST00000502781 ABHD14A-ACY1A0A1B0GW23 586 aa27.91■■■□□ 2.06
LSM6-202ENST00000502781 ASAP2O43150 1006 aa27.91■■■□□ 2.06
LSM6-202ENST00000502781 PLCG1P19174 1290 aa27.91■■■□□ 2.06
LSM6-202ENST00000502781 FAM43BQ6ZT52 329 aaPredicted RBP27.91■■■□□ 2.06
LSM6-202ENST00000502781 SYT2Q8N9I0 419 aaPredicted RBP27.91■■■□□ 2.06
LSM6-202ENST00000502781 PADI3Q9ULW8 664 aa27.91■■■□□ 2.06
LSM6-202ENST00000502781 PCDHA7Q9UN72 937 aa27.91■■■□□ 2.06
LSM6-202ENST00000502781 NOC2LQ9Y3T9 749 aaKnown RBP27.91■■■□□ 2.06
LSM6-202ENST00000502781 DARSP14868 501 aaKnown RBP27.9■■■□□ 2.06
LSM6-202ENST00000502781 EIF4BP23588 611 aaKnown RBP27.9■■■□□ 2.06
LSM6-202ENST00000502781 CD52P31358 61 aa27.9■■■□□ 2.06
LSM6-202ENST00000502781 LAMTOR4Q0VGL1 99 aa27.9■■■□□ 2.06
LSM6-202ENST00000502781 MXD4Q14582 209 aaPredicted RBP27.9■■■□□ 2.06
LSM6-202ENST00000502781 LRIT3Q3SXY7 679 aa27.9■■■□□ 2.06
LSM6-202ENST00000502781 KSR1Q8IVT5 923 aa27.9■■■□□ 2.06
LSM6-202ENST00000502781 LEO1Q8WVC0 666 aaPredicted RBP27.9■■■□□ 2.06
LSM6-202ENST00000502781 ZNF668Q96K58 619 aaPredicted RBP27.9■■■□□ 2.06
LSM6-202ENST00000502781 MTIF3Q9H2K0 278 aaKnown RBP27.9■■■□□ 2.06
LSM6-202ENST00000502781 IFT122Q9HBG6 1241 aa27.9■■■□□ 2.06
LSM6-202ENST00000502781 A0A087WZ62 844 aa27.89■■■□□ 2.06
LSM6-202ENST00000502781 SLC12A3P55017 1021 aa27.89■■■□□ 2.06
LSM6-202ENST00000502781 IKBKEQ14164 716 aa27.89■■■□□ 2.06
LSM6-202ENST00000502781 SHC4Q6S5L8 630 aa27.89■■■□□ 2.06
LSM6-202ENST00000502781 C1orf186Q6ZWK4 172 aa27.89■■■□□ 2.06
LSM6-202ENST00000502781 ASAP3Q8TDY4 903 aa27.89■■■□□ 2.06
LSM6-202ENST00000502781 NLRP7Q8WX94 980 aa27.89■■■□□ 2.06
LSM6-202ENST00000502781 FDXACB1Q9BRP7 624 aaPredicted RBP27.89■■■□□ 2.06
LSM6-202ENST00000502781 ERVK-5Q9HDB9 667 aa27.89■■■□□ 2.06
LSM6-202ENST00000502781 GPRC5CQ9NQ84 441 aa27.89■■■□□ 2.06
LSM6-202ENST00000502781 LAMA3Q16787 3333 aa27.89■■■□□ 2.05
LSM6-202ENST00000502781 EFCAB14O75071 495 aa27.88■■■□□ 2.05
LSM6-202ENST00000502781 RPS6KA5O75582 802 aa27.88■■■□□ 2.05
LSM6-202ENST00000502781 PLA2G4BP0C869 781 aa27.88■■■□□ 2.05
LSM6-202ENST00000502781 TXLNAP40222 546 aa27.88■■■□□ 2.05
LSM6-202ENST00000502781 POU5F1BQ06416 359 aa27.88■■■□□ 2.05
LSM6-202ENST00000502781 HABP4Q5JVS0 413 aaKnown RBP27.88■■■□□ 2.05
LSM6-202ENST00000502781 RINT1Q6NUQ1 792 aa27.88■■■□□ 2.05
LSM6-202ENST00000502781 FAM228AQ86W67 206 aa27.88■■■□□ 2.05
LSM6-202ENST00000502781 RUSC1Q9BVN2 902 aa27.88■■■□□ 2.05
LSM6-202ENST00000502781 SCAND2PQ9GZW5 306 aaPredicted RBP27.88■■■□□ 2.05
LSM6-202ENST00000502781 POLR3FQ9H1D9 316 aaPredicted RBP27.88■■■□□ 2.05
LSM6-202ENST00000502781 CCDC39Q9UFE4 941 aa27.88■■■□□ 2.05
LSM6-202ENST00000502781 NCLP19338 710 aaKnown RBP27.87■■■□□ 2.05
LSM6-202ENST00000502781 GLRA2P23416 452 aa27.87■■■□□ 2.05
LSM6-202ENST00000502781 ME1P48163 572 aa27.87■■■□□ 2.05
LSM6-202ENST00000502781 WDR5P61964 334 aaKnown RBP27.87■■■□□ 2.05
LSM6-202ENST00000502781 PAK2Q13177 524 aa27.87■■■□□ 2.05
LSM6-202ENST00000502781 NAALADL2Q58DX5 795 aa27.87■■■□□ 2.05
LSM6-202ENST00000502781 RAD54LQ92698 747 aa27.87■■■□□ 2.05
LSM6-202ENST00000502781 SPATA32Q96LK8 384 aa27.87■■■□□ 2.05
LSM6-202ENST00000502781 NLRP4Q96MN2 994 aa27.87■■■□□ 2.05
LSM6-202ENST00000502781 GCOM2Q9BZD3 368 aaPredicted RBP27.87■■■□□ 2.05
LSM6-202ENST00000502781 KCND2Q9NZV8 630 aa27.87■■■□□ 2.05
LSM6-202ENST00000502781 LOXHD1Q8IVV2 1947 aa27.87■■■□□ 2.05
LSM6-202ENST00000502781 A0A087X0B3 334 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 GPR182O15218 404 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 GUCY2CP25092 1073 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 ODR4Q5SWX8 454 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 MAEAQ7L5Y9 396 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 IFNLR1Q8IU57 520 aaPredicted RBP27.86■■■□□ 2.05
LSM6-202ENST00000502781 RNF149Q8NC42 400 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 RASSF8Q8NHQ8 419 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 SCLT1Q96NL6 688 aa27.86■■■□□ 2.05
LSM6-202ENST00000502781 STK17AQ9UEE5 414 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms