RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CD247P20963 164 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 FGFR2P21802 821 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 HOXD10P28358 340 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 CLCN7P51798 805 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 MOGSQ13724 837 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 PUM3Q15397 648 aaKnown RBP6.38□□□□□ -1.39
PTCD3-219ENST00000494323 MTERF2Q49AM1 385 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 C2orf27AQ580R0 203 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 FKBP1CQ5VVH2 108 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 NFXL1Q6ZNB6 911 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 ANKRD23Q86SG2 305 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 STK11IPQ8N1F8 1099 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 WDR66Q8TBY9 1149 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 ENOX1Q8TC92 643 aaKnown RBP6.38□□□□□ -1.39
PTCD3-219ENST00000494323 NETO1Q8TDF5 533 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 FAM151AQ8WW52 585 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 SHISA4Q96DD7 197 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 HOOK2Q96ED9 719 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 GPATCH3Q96I76 525 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 GPR62Q9BZJ7 368 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 PRDM14Q9GZV8 571 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 SIL1Q9H173 461 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 GP6Q9HCN6 339 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 FANCLQ9NW38 375 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 SUSD2Q9UGT4 822 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 ZMYM5Q9UJ78 669 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 ZNF112Q9UJU3 913 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 GABRQQ9UN88 632 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 SLC5A6Q9Y289 635 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 ZNF451Q9Y4E5 1061 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 ZHX2Q9Y6X8 837 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 LAMB1P07942 1786 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 RBBP6Q7Z6E9 1792 aaKnown RBP6.38□□□□□ -1.39
PTCD3-219ENST00000494323 SZT2Q5T011 3432 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 MYPNQ86TC9 1320 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 TMEM265A0A087WTH1 108 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 EYA2O00167 538 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 AGRPO00253 132 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 ANP32CO43423 234 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 SIGLEC6O43699 453 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 GJB1P08034 283 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 HMGB1P09429 215 aaKnown RBP6.37□□□□□ -1.39
PTCD3-219ENST00000494323 SLC5A1P13866 664 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 NCLP19338 710 aaKnown RBP6.37□□□□□ -1.39
PTCD3-219ENST00000494323 ITIH2P19823 946 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 PRDX5P30044 214 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 TXKP42681 527 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 RFX5P48382 616 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-219ENST00000494323 PRMT2P55345 433 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 PRKCZQ05513 592 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 NMIQ13287 307 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-219ENST00000494323 IFI16Q16666 785 aaKnown RBP6.37□□□□□ -1.39
PTCD3-219ENST00000494323 NKPD1Q17RQ9 610 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 SLC10A6Q3KNW5 377 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 NOL9Q5SY16 702 aaKnown RBP6.37□□□□□ -1.39
PTCD3-219ENST00000494323 ATG9AQ7Z3C6 839 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 KIAA0907Q7Z7F0 614 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-219ENST00000494323 SPACA3Q8IXA5 215 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 SSH1Q8WYL5 1049 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 MISP3Q96FF7 219 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 TRIT1Q9H3H1 467 aaKnown RBP6.37□□□□□ -1.39
PTCD3-219ENST00000494323 ZCCHC17Q9NP64 241 aaKnown RBP6.37□□□□□ -1.39
PTCD3-219ENST00000494323 PAK6Q9NQU5 681 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-219ENST00000494323 GPATCH2Q9NW75 528 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 SUGT1Q9Y2Z0 365 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 SNX11Q9Y5W9 270 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 FHOD1Q9Y613 1164 aa6.37□□□□□ -1.39
PTCD3-219ENST00000494323 MAST3O60307 1309 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 CXCL11O14625 94 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 ADCY3O60266 1144 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 CDC45O75419 566 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 TFRCP02786 760 aaKnown RBP6.36□□□□□ -1.39
PTCD3-219ENST00000494323 RGS3P49796 1198 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 TIMM10P62072 90 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 UBXN2AP68543 259 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 CLEC16AQ2KHT3 1053 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 SV2CQ496J9 727 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 GADL1Q6ZQY3 521 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 THAP5Q7Z6K1 395 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 ADAT2Q7Z6V5 191 aaKnown RBP6.36□□□□□ -1.39
PTCD3-219ENST00000494323 CRACR2BQ8N4Y2 399 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-219ENST00000494323 SYTL5Q8TDW5 730 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-219ENST00000494323 THAP3Q8WTV1 239 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-219ENST00000494323 U2AF1L4Q8WU68 220 aaKnown RBP6.36□□□□□ -1.39
PTCD3-219ENST00000494323 LPIN2Q92539 896 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 GNL3LQ9NVN8 582 aaKnown RBP6.36□□□□□ -1.39
PTCD3-219ENST00000494323 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-219ENST00000494323 PFDN2Q9UHV9 154 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 PLAGL2Q9UPG8 496 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 DIS3Q9Y2L1 958 aaKnown RBP6.36□□□□□ -1.39
PTCD3-219ENST00000494323 RNF114Q9Y508 228 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 ST14Q9Y5Y6 855 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 U3KQE9 123 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 ARAP2Q8WZ64 1704 aa6.36□□□□□ -1.39
PTCD3-219ENST00000494323 ADGRA2Q96PE1 1338 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 DDTLA6NHG4 134 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 SGPL1O95470 568 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 SRFP11831 508 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 ADORA1P30542 326 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 PHKA1P46020 1223 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms