RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PHF19Q5T6S3 580 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 RNF219Q5W0B1 726 aaPredicted RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 TMEM200BQ69YZ2 307 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 KRT40Q6A162 431 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 IQSEC1Q6DN90 963 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 KIAA1841Q6NSI8 718 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 ESRP1Q6NXG1 681 aaKnown RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 LILRA6Q6PI73 481 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 LMBR1LQ6UX01 489 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 HDGFL2Q7Z4V5 671 aaPredicted RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 RTN4RL1Q86UN2 441 aaPredicted RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 DDX42Q86XP3 938 aaKnown RBP eCLIP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 SPATS2Q86XZ4 545 aaKnown RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 GLB1L2Q8IW92 636 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 ZDHHC14Q8IZN3 488 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 TTC9BQ8N6N2 239 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 CDYL2Q8N8U2 506 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 ZNF610Q8N9Z0 462 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 GIMAP8Q8ND71 665 aaPredicted RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 FEZF2Q8TBJ5 459 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 SLC5A5Q92911 643 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 C16orf92Q96LL3 132 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 BDH2Q9BUT1 245 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 ZDHHC5Q9C0B5 715 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 KATNBL1Q9H079 304 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 OR10A2Q9H208 303 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 PCDH12Q9NPG4 1184 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 POLR3BQ9NW08 1133 aaPredicted RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 ATP8A1Q9Y2Q0 1164 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 NOC2LQ9Y3T9 749 aaKnown RBP3.24□□□□□ -1.89
LMNB1-207ENST00000494185 NR2E1Q9Y466 385 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 SLC4A7Q9Y6M7 1214 aa3.24□□□□□ -1.89
LMNB1-207ENST00000494185 WASHC2AQ641Q2 1341 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 hCG_2014768A0A024R1R8 64 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 A0A1B0GTL3 188 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 OTOL1A6NHN0 477 aaPredicted RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 GOLGA8BA8MQT2 603 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 GPR39O43194 453 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 B4GALT4O60513 344 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 KLHL18O94889 574 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 POU3F3P20264 500 aaPredicted RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 HOXA5P20719 270 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 EPHB4P54760 987 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 MLLT6P55198 1093 aaPredicted RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 ANAPC15P60006 121 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 SPIDRQ14159 915 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 RTP5Q14D33 572 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 EIF4HQ15056 248 aaKnown RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 TERF2Q15554 542 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 SPATS1Q496A3 300 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 AGBL4Q5VU57 503 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 BROXQ5VW32 411 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 USP30Q70CQ3 517 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 TP53I13Q8NBR0 393 aaPredicted RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 OR5AN1Q8NGI8 311 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 RTF1Q92541 710 aaKnown RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 FOXRED1Q96CU9 486 aaPredicted RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 SLC7A6OSQ96CW6 309 aaPredicted RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 FAM89AQ96GI7 184 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 GPATCH3Q96I76 525 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 DYDC2Q96IM9 177 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 WDR92Q96MX6 357 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 SAMD11Q96NU1 681 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 LMF1Q96S06 567 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 AMNQ9BXJ7 453 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 FAM126AQ9BYI3 521 aaPredicted RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 XYLT2Q9H1B5 865 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 NELFAQ9H3P2 528 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 ZMAT4Q9H898 229 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 C14orf93Q9H972 538 aaKnown RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 DENND2AQ9ULE3 1009 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 INVSQ9Y283 1065 aa3.23□□□□□ -1.89
LMNB1-207ENST00000494185 NOP58Q9Y2X3 529 aaKnown RBP3.23□□□□□ -1.89
LMNB1-207ENST00000494185 PMS2P1A4D2B8 440 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 ALG1L2C9J202 215 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 ARHGAP6O43182 974 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 KDM1AO60341 852 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 IL18BPO95998 194 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 ADCY8P40145 1251 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 IGBP1P78318 339 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 MEF2AQ02078 507 aaPredicted RBP3.22□□□□□ -1.89
LMNB1-207ENST00000494185 GAGE13Q4V321 117 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 KANK2Q63ZY3 851 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 LRSAM1Q6UWE0 723 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 NECAB2Q7Z6G3 386 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 RASSF3Q86WH2 238 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 AMOTL1Q8IY63 956 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 ADGRG2Q8IZP9 1017 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 CLRN3Q8NCR9 226 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 NUDT10Q8NFP7 164 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 SSH1Q8WYL5 1049 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 NUDT11Q96G61 164 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 RAX2Q96IS3 184 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 LOXL4Q96JB6 756 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 UIMC1Q96RL1 719 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 NOL10Q9BSC4 688 aaKnown RBP3.22□□□□□ -1.89
LMNB1-207ENST00000494185 C12orf65Q9H3J6 166 aaKnown RBP3.22□□□□□ -1.89
LMNB1-207ENST00000494185 POFUT1Q9H488 388 aa3.22□□□□□ -1.89
LMNB1-207ENST00000494185 METTL14Q9HCE5 456 aaKnown RBP3.22□□□□□ -1.89
LMNB1-207ENST00000494185 MSRAQ9UJ68 235 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms