RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PQBP1O60828 265 aaKnown RBP12.8□□□□□ -0.36
LSM2-214ENST00000493387 HIP1RO75146 1068 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 FAM13AO94988 1023 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 SMC2O95347 1197 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 GAP43P17677 238 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 SCP2P22307 547 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 ARL2P36404 184 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 SOX10P56693 466 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 ASIC1P78348 528 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 TLE2Q04725 743 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 BFSP2Q13515 415 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 GIT2Q14161 759 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 TFDP1Q14186 410 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 HIC1Q14526 733 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 POSTNQ15063 836 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 TRIM60Q495X7 471 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 KIAA0319LQ8IZA0 1049 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 SLC17A8Q8NDX2 589 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 CAGE1Q8TC20 777 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 GPT2Q8TD30 523 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 PPP1R13LQ8WUF5 828 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 SYAP1Q96A49 352 aaPredicted RBP12.8□□□□□ -0.36
LSM2-214ENST00000493387 TMEM143Q96AN5 459 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 GTPBP4Q9BZE4 634 aaKnown RBP12.8□□□□□ -0.36
LSM2-214ENST00000493387 TRPV6Q9H1D0 765 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 POLR3FQ9H1D9 316 aaPredicted RBP12.8□□□□□ -0.36
LSM2-214ENST00000493387 CLSTN2Q9H4D0 955 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 PARVGQ9HBI0 331 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 TRMT13Q9NUP7 481 aaKnown RBP12.8□□□□□ -0.36
LSM2-214ENST00000493387 LARSQ9P2J5 1176 aaKnown RBP12.8□□□□□ -0.36
LSM2-214ENST00000493387 SEL1LQ9UBV2 794 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 AKT3Q9Y243 479 aa12.8□□□□□ -0.36
LSM2-214ENST00000493387 H0YCG3 227 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 ABCD1P33897 745 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 CLCN3P51790 818 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 ZNF131P52739 623 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 SMTNP53814 917 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 MDM2Q00987 491 aaPredicted RBP12.79□□□□□ -0.36
LSM2-214ENST00000493387 POU5F1BQ06416 359 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 RBL2Q08999 1139 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 DMP1Q13316 513 aaPredicted RBP12.79□□□□□ -0.36
LSM2-214ENST00000493387 NFKBIBQ15653 356 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 LRRC26Q2I0M4 334 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 RUFY4Q6ZNE9 571 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 UNC13DQ70J99 1090 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 MAEAQ7L5Y9 396 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 DYMQ7RTS9 669 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 ZNF410Q86VK4 478 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 LRRC71Q8N4P6 559 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 DNAJB3Q8WWF6 145 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 STAMQ92783 540 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 DNAJC19Q96DA6 116 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 CTAGE1Q96RT6 745 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 REEP2Q9BRK0 252 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 FAM49AQ9H0Q0 323 aaPredicted RBP12.79□□□□□ -0.36
LSM2-214ENST00000493387 NUP62CLQ9H1M0 184 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 PANK4Q9NVE7 773 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 ATP11BQ9Y2G3 1177 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 PHLPP2Q6ZVD8 1323 aa12.79□□□□□ -0.36
LSM2-214ENST00000493387 NPHP3-ACAD11A0A0J9YXS1 232 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 FRMD3A2A2Y4 597 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 PARNO95453 639 aaKnown RBP12.78□□□□□ -0.36
LSM2-214ENST00000493387 MAPTP10636 758 aaKnown RBP12.78□□□□□ -0.36
LSM2-214ENST00000493387 PLS3P13797 630 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 IDEP14735 1019 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 NAMPTP43490 491 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 MRPS6P82932 125 aaKnown RBP12.78□□□□□ -0.36
LSM2-214ENST00000493387 LAMTOR4Q0VGL1 99 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 DPYDQ12882 1025 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 MAPK7Q13164 816 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 MKRN4PQ13434 485 aaPredicted RBP12.78□□□□□ -0.36
LSM2-214ENST00000493387 CUL4BQ13620 913 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 KLHL40Q2TBA0 621 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 FAM43BQ6ZT52 329 aaPredicted RBP12.78□□□□□ -0.36
LSM2-214ENST00000493387 MYCT1Q8N699 235 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 SPIRE2Q8WWL2 714 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 PRPF31Q8WWY3 499 aaKnown RBP12.78□□□□□ -0.36
LSM2-214ENST00000493387 GSDMAQ96QA5 445 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 ZHX3Q9H4I2 956 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 RMND1Q9NWS8 449 aa12.78□□□□□ -0.36
LSM2-214ENST00000493387 HTTP42858 3142 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
LSM2-214ENST00000493387 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 CLTBP09497 229 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 GLRA2P23416 452 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 THPOP40225 353 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 PHKA2P46019 1235 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 RAD51AP2Q09MP3 1159 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 FAAP100Q0VG06 881 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 PSMD2Q13200 908 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 DRP2Q13474 957 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 KCNB1Q14721 858 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 TRIM71Q2Q1W2 868 aaKnown RBP12.77□□□□□ -0.37
LSM2-214ENST00000493387 HERC4Q5GLZ8 1057 aaPredicted RBP12.77□□□□□ -0.37
LSM2-214ENST00000493387 FAM26DQ5JW98 314 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 ODR4Q5SWX8 454 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 CCDC183Q5T5S1 534 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 RHPN2Q8IUC4 686 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 GRAMD1CQ8IYS0 662 aa12.77□□□□□ -0.37
LSM2-214ENST00000493387 DAW1Q8N136 415 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms