RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 ZNF536O15090 1300 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 EPHB6O15197 1021 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 MED24O75448 989 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 CFBP00751 764 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 PLEKP08567 350 aaPredicted RBP7.72□□□□□ -1.17
HERC4-211ENST00000492996 PLA2G4BP0C869 781 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 ARHGAP25P42331 645 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 ORC2Q13416 577 aaPredicted RBP7.72□□□□□ -1.17
HERC4-211ENST00000492996 DNAJC21Q5F1R6 531 aaKnown RBP7.72□□□□□ -1.17
HERC4-211ENST00000492996 FAM26FQ5R3K3 315 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 MFSD14CQ5VZR4 134 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 KIAA1328Q86T90 577 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 NEK11Q8NG66 645 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 SMCR8Q8TEV9 937 aaPredicted RBP7.72□□□□□ -1.17
HERC4-211ENST00000492996 NOC3LQ8WTT2 800 aaKnown RBP7.72□□□□□ -1.17
HERC4-211ENST00000492996 ZNHIT6Q9NWK9 470 aaKnown RBP7.72□□□□□ -1.17
HERC4-211ENST00000492996 CAPN11Q9UMQ6 739 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 PVALEFA0A1B0GWK0 134 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 A0A1W2PQC6 194 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 CTAGE9A4FU28 777 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 EFCAB8A8MWE9 144 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 PIK3CDO00329 1044 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 POLR3GO15318 223 aaPredicted RBP7.72□□□□□ -1.17
HERC4-211ENST00000492996 GCFC2P16383 781 aaKnown RBP7.72□□□□□ -1.17
HERC4-211ENST00000492996 PSMC6P62333 389 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 TMEM119Q4V9L6 283 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 KIAA1755Q5JYT7 1200 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 CCDC122Q5T0U0 273 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 MCTP2Q6DN12 878 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 SLC39A5Q6ZMH5 540 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 MYOCDQ8IZQ8 938 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 DNAJC19Q96DA6 116 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 MAML3Q96JK9 1138 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 IWS1Q96ST2 819 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 CRACR2AQ9BSW2 395 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 NDST4Q9H3R1 872 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 ARHGEF10LQ9HCE6 1279 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 JRKLQ9Y4A0 524 aa7.72□□□□□ -1.17
HERC4-211ENST00000492996 FAM86B1E9PN63 330 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 PITPNM1O00562 1244 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 FAM86B2P0C5J1 330 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 H2AFXP16104 143 aaPredicted RBP7.71□□□□□ -1.17
HERC4-211ENST00000492996 GUCY2CP25092 1073 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 ENOX2Q16206 610 aaKnown RBP7.71□□□□□ -1.17
HERC4-211ENST00000492996 CCDC40Q4G0X9 1142 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 FAM83BQ5T0W9 1011 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 IQSEC1Q6DN90 963 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 GUF1Q8N442 669 aaKnown RBP7.71□□□□□ -1.17
HERC4-211ENST00000492996 BCAS3Q9H6U6 928 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 PRR12Q9ULL5 1215 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 GABRQQ9UN88 632 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 DUSP10Q9Y6W6 482 aa7.71□□□□□ -1.17
HERC4-211ENST00000492996 MYO1CO00159 1063 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 CHMP2AO43633 222 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 CACNB2Q08289 660 aaPredicted RBP7.71□□□□□ -1.18
HERC4-211ENST00000492996 PUS10Q3MIT2 529 aaKnown RBP7.71□□□□□ -1.18
HERC4-211ENST00000492996 PPP4R3CPQ6ZMV5 832 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 VWCEQ96DN2 955 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 DNAJC7Q99615 494 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 LACRTQ9GZZ8 138 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 SPATC1LQ9H0A9 340 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 NLRC4Q9NPP4 1024 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 CWC15Q9P013 229 aaKnown RBP7.71□□□□□ -1.18
HERC4-211ENST00000492996 HDAC6Q9UBN7 1215 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 MACROD2A1Z1Q3 448 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 RCCD1A6NED2 376 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 IPO7O95373 1038 aaKnown RBP7.71□□□□□ -1.18
HERC4-211ENST00000492996 FECHP22830 423 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 USP11P51784 963 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 CHMP4BP1P59074 171 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 APBA1Q02410 837 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 VWA3BQ502W6 1294 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 NFRKBQ6P4R8 1299 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 KCNV1Q6PIU1 500 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 TMCO3Q6UWJ1 677 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 CATSPER3Q86XQ3 398 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 TDHQ8IZJ6 230 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 PATJQ8NI35 1801 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 NAPGQ99747 312 aaPredicted RBP7.71□□□□□ -1.18
HERC4-211ENST00000492996 TSG101Q99816 390 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 NHEJ1Q9H9Q4 299 aaPredicted RBP7.71□□□□□ -1.18
HERC4-211ENST00000492996 FBXO28Q9NVF7 368 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 RGL1Q9NZL6 768 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 CDC23Q9UJX2 597 aa7.71□□□□□ -1.18
HERC4-211ENST00000492996 C5orf67F2Z3F1 127 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 RHOXF2BP0C7M4 288 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 CYP11B2P19099 503 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 HSD17B4P51659 736 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 ZBED6P86452 979 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 RRAGAQ7L523 313 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 NIPA1Q7RTP0 329 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 RNF217Q8TC41 542 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 ZKSCAN4Q969J2 545 aaPredicted RBP7.7□□□□□ -1.18
HERC4-211ENST00000492996 RHOXF2Q9BQY4 288 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 TTYH3Q9C0H2 523 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 NT5C3AQ9H0P0 336 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 UNC93B1Q9H1C4 597 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 KCNMB3Q9NPA1 279 aa7.7□□□□□ -1.18
HERC4-211ENST00000492996 ARGLU1Q9NWB6 273 aaPredicted RBP7.7□□□□□ -1.18
HERC4-211ENST00000492996 BTBD7Q9P203 1132 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms