RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 FAM20BO75063 409 aa6.28□□□□□ -1.4
PHC3-213ENST00000491258 EFCAB14O75071 495 aa6.28□□□□□ -1.4
PHC3-213ENST00000491258 BMP5P22003 454 aa6.28□□□□□ -1.4
PHC3-213ENST00000491258 IRF9Q00978 393 aa6.28□□□□□ -1.4
PHC3-213ENST00000491258 FAM111BQ6SJ93 734 aa6.28□□□□□ -1.4
PHC3-213ENST00000491258 RPUSD2Q8IZ73 545 aaKnown RBP6.28□□□□□ -1.4
PHC3-213ENST00000491258 C2orf69Q8N8R5 385 aa6.28□□□□□ -1.4
PHC3-213ENST00000491258 FOXB1Q99853 325 aa6.28□□□□□ -1.4
PHC3-213ENST00000491258 GPR87Q9BY21 358 aa6.28□□□□□ -1.4
PHC3-213ENST00000491258 UBE2QL1A1L167 161 aa6.27□□□□□ -1.41
PHC3-213ENST00000491258 PTGS2P35354 604 aa6.27□□□□□ -1.41
PHC3-213ENST00000491258 TCIRG1Q13488 830 aa6.27□□□□□ -1.41
PHC3-213ENST00000491258 TOB2Q14106 344 aaPredicted RBP6.27□□□□□ -1.41
PHC3-213ENST00000491258 RTN4RL1Q86UN2 441 aaPredicted RBP6.27□□□□□ -1.41
PHC3-213ENST00000491258 OR5AN1Q8NGI8 311 aa6.27□□□□□ -1.41
PHC3-213ENST00000491258 SLC7A14Q8TBB6 771 aa6.27□□□□□ -1.41
PHC3-213ENST00000491258 FOXRED1Q96CU9 486 aaPredicted RBP6.27□□□□□ -1.41
PHC3-213ENST00000491258 TCF25Q9BQ70 676 aa6.27□□□□□ -1.41
PHC3-213ENST00000491258 TRAF5O00463 557 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 KRT37O76014 449 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 LONRF2Q1L5Z9 754 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 KRT40Q6A162 431 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 GSTCDQ8NEC7 633 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 HAS1Q92839 578 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 PGBD4Q96DM1 585 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 SFMBT1Q9UHJ3 866 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 RCAN3Q9UKA8 241 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 PCSK5Q92824 1860 aa6.26□□□□□ -1.41
PHC3-213ENST00000491258 RGS3P49796 1198 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 ANTXR2P58335 489 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 ADAM8P78325 824 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 SMAD3P84022 425 aaKnown RBP6.25□□□□□ -1.41
PHC3-213ENST00000491258 SLC6A3Q01959 620 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 COL10A1Q03692 680 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 DGKDQ16760 1214 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 TMEM177Q53S58 311 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 FKBP15Q5T1M5 1219 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 MRGPREQ86SM8 312 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 MB21D1Q8N884 522 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 SLC25A43Q8WUT9 341 aaPredicted RBP6.25□□□□□ -1.41
PHC3-213ENST00000491258 E2F7Q96AV8 911 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 ZNF428Q96B54 188 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 SCLYQ96I15 445 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 IL23AQ9NPF7 189 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 SIRPGQ9P1W8 387 aa6.25□□□□□ -1.41
PHC3-213ENST00000491258 PRLP01236 227 aa6.24□□□□□ -1.41
PHC3-213ENST00000491258 ROM1Q03395 351 aa6.24□□□□□ -1.41
PHC3-213ENST00000491258 ZC3H12BQ5HYM0 836 aaKnown RBP6.24□□□□□ -1.41
PHC3-213ENST00000491258 CC2D1AQ6P1N0 951 aaPredicted RBP6.24□□□□□ -1.41
PHC3-213ENST00000491258 BRAPQ7Z569 592 aa6.24□□□□□ -1.41
PHC3-213ENST00000491258 ELOA2Q8IYF1 753 aaPredicted RBP6.24□□□□□ -1.41
PHC3-213ENST00000491258 ATXN2LQ8WWM7 1075 aaKnown RBP6.24□□□□□ -1.41
PHC3-213ENST00000491258 ARL8AQ96BM9 186 aa6.24□□□□□ -1.41
PHC3-213ENST00000491258 BOCQ9BWV1 1114 aa6.24□□□□□ -1.41
PHC3-213ENST00000491258 WDR26Q9H7D7 661 aa6.24□□□□□ -1.41
PHC3-213ENST00000491258 NCDNQ9UBB6 729 aa6.24□□□□□ -1.41
PHC3-213ENST00000491258 XDHP47989 1333 aa6.24□□□□□ -1.41
PHC3-213ENST00000491258 NPTXRO95502 500 aa6.23□□□□□ -1.41
PHC3-213ENST00000491258 ZBTB48P10074 688 aaPredicted RBP6.23□□□□□ -1.41
PHC3-213ENST00000491258 RABL3Q5HYI8 236 aa6.23□□□□□ -1.41
PHC3-213ENST00000491258 SLFN12LQ6IEE8 588 aa6.23□□□□□ -1.41
PHC3-213ENST00000491258 ABHD17CQ6PCB6 329 aa6.23□□□□□ -1.41
PHC3-213ENST00000491258 HOMEZQ8IX15 550 aa6.23□□□□□ -1.41
PHC3-213ENST00000491258 SYNE4Q8N205 404 aa6.23□□□□□ -1.41
PHC3-213ENST00000491258 ZNF276Q8N554 614 aa6.23□□□□□ -1.41
PHC3-213ENST00000491258 PLA2G15Q8NCC3 412 aa6.23□□□□□ -1.41
PHC3-213ENST00000491258 NKD2Q969F2 451 aaPredicted RBP6.23□□□□□ -1.41
PHC3-213ENST00000491258 TNFRSF18Q9Y5U5 241 aa6.23□□□□□ -1.41
PHC3-213ENST00000491258 TCRBV16S1A1N1A0A5B0 115 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 KLRG2A4D1S0 409 aaPredicted RBP6.22□□□□□ -1.41
PHC3-213ENST00000491258 GOLGA6L6A8MZA4 724 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 TOX4O94842 621 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 GCP02774 474 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 VSIG10L2P0DP72 767 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 KCNA6P17658 529 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 KIF11P52732 1056 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 RABGGTBP53611 331 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 GAGE13Q4V321 117 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 TRIM61Q5EBN2 209 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 NBPF6Q5VWK0 638 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 GPR150Q8NGU9 434 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 NBPF4Q96M43 638 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 MNTQ99583 582 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 DNAI1Q9UI46 699 aa6.22□□□□□ -1.41
PHC3-213ENST00000491258 UBA6A0AVT1 1052 aaPredicted RBP6.21□□□□□ -1.42
PHC3-213ENST00000491258 MFAP3LO75121 409 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 NUDT3O95989 172 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 FNTBP49356 437 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 PRAMEF9Q5VWM5 478 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 MBNL2Q5VZF2 373 aaKnown RBP6.21□□□□□ -1.42
PHC3-213ENST00000491258 MFSD5Q6N075 450 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 FGD2Q7Z6J4 655 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 CLEC14AQ86T13 490 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 VRK3Q8IV63 474 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 DYDC2Q96IM9 177 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 MAML3Q96JK9 1138 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 WDR92Q96MX6 357 aa6.21□□□□□ -1.42
PHC3-213ENST00000491258 POLR3BQ9NW08 1133 aaPredicted RBP6.21□□□□□ -1.42
PHC3-213ENST00000491258 KCMF1Q9P0J7 381 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms