RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 NRDCO43847 1150 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 TAF5LO75529 589 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 USP2O75604 605 aaPredicted RBP5.66□□□□□ -1.5
CSTF1-205ENST00000490539 CIAO1O76071 339 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 PDE8BO95263 885 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 TBC1D8O95759 1140 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 HIBADHP31937 336 aaKnown RBP5.66□□□□□ -1.5
CSTF1-205ENST00000490539 CTSKP43235 329 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 GMPSP49915 693 aaPredicted RBP5.66□□□□□ -1.5
CSTF1-205ENST00000490539 CXCL9Q07325 125 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 MESP2Q0VG99 397 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 PPP2R5DQ14738 602 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 FXNQ16595 210 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 STRIP1Q5VSL9 837 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 HLA-DQA1Q5Y7H0 255 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 TTLL5Q6EMB2 1281 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 POMZP3Q6PJE2 187 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 IRF2BP1Q8IU81 584 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 ERC1Q8IUD2 1116 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 TMEM57Q8N5G2 664 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 FBXO15Q8NCQ5 510 aaPredicted RBP5.66□□□□□ -1.5
CSTF1-205ENST00000490539 DCPSQ96C86 337 aaKnown RBP5.66□□□□□ -1.5
CSTF1-205ENST00000490539 ZDHHC15Q96MV8 337 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 DIRC2Q96SL1 478 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 MEIS3Q99687 375 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 RNF32Q9H0A6 362 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 SIL1Q9H173 461 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 GPRC5DQ9NZD1 345 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 PRKAG3Q9UGI9 489 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 YBX2Q9Y2T7 364 aaKnown RBP5.66□□□□□ -1.5
CSTF1-205ENST00000490539 LAMA3Q16787 3333 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 WDR33Q9C0J8 1336 aaKnown RBP5.66□□□□□ -1.5
CSTF1-205ENST00000490539 ZNF541Q9H0D2 1346 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 RASSF10A6NK89 507 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 H0Y8X5 98 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 PSMD14O00487 310 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 SMAD7O15105 426 aaKnown RBP5.65□□□□□ -1.5
CSTF1-205ENST00000490539 EPHX1P07099 455 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 VIL1P09327 827 aaKnown RBP5.65□□□□□ -1.5
CSTF1-205ENST00000490539 MVPQ14764 893 aaKnown RBP5.65□□□□□ -1.5
CSTF1-205ENST00000490539 EPHA10Q5JZY3 1008 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 LARP1BQ659C4 914 aaKnown RBP5.65□□□□□ -1.5
CSTF1-205ENST00000490539 OLFML2BQ68BL8 750 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 KRTAP5-3Q6L8H2 238 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 PRR23BQ6ZRT6 265 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 C15orf52Q6ZUT6 534 aaKnown RBP5.65□□□□□ -1.5
CSTF1-205ENST00000490539 SKAP1Q86WV1 359 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 ANKRD44Q8N8A2 993 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 ZSCAN18Q8TBC5 510 aaPredicted RBP5.65□□□□□ -1.5
CSTF1-205ENST00000490539 TBC1D22AQ8WUA7 517 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 LPIN2Q92539 896 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 HHIPL1Q96JK4 782 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 TINF2Q9BSI4 451 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 G6PC3Q9BUM1 346 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 SLC12A9Q9BXP2 914 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 TAF1DQ9H5J8 278 aaPredicted RBP5.65□□□□□ -1.5
CSTF1-205ENST00000490539 CRTAC1Q9NQ79 661 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 AP5S1Q9NUS5 200 aa5.65□□□□□ -1.5
CSTF1-205ENST00000490539 CNOT7Q9UIV1 285 aaKnown RBP5.65□□□□□ -1.5
CSTF1-205ENST00000490539 PASKQ96RG2 1323 aa5.65□□□□□ -1.51
CSTF1-205ENST00000490539 TIAM2Q8IVF5 1701 aa5.65□□□□□ -1.51
CSTF1-205ENST00000490539 A0A1W2PQJ5 194 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 B8ZZF3 427 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 CBFA2T2O43439 604 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 PSPNO60542 156 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 SURF6O75683 361 aaKnown RBP5.64□□□□□ -1.51
CSTF1-205ENST00000490539 SASH1O94885 1247 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 CD3EP07766 207 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 TMEM253P0C7T8 217 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 RAP1GAPP47736 663 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 RBM5P52756 815 aaKnown RBP eCLIP5.64□□□□□ -1.51
CSTF1-205ENST00000490539 AMPD2Q01433 879 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 MTX1Q13505 466 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 LAPTM5Q13571 262 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 ATP2B3Q16720 1220 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 EEF1DP3Q658K8 133 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 RPAP2Q8IXW5 612 aaPredicted RBP5.64□□□□□ -1.51
CSTF1-205ENST00000490539 ZGPATQ8N5A5 531 aaKnown RBP5.64□□□□□ -1.51
CSTF1-205ENST00000490539 FAM169BQ8N8A8 192 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 ADCY4Q8NFM4 1077 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 PANK1Q8TE04 598 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 PPP1R14AQ96A00 147 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 INTS4Q96HW7 963 aaKnown RBP5.64□□□□□ -1.51
CSTF1-205ENST00000490539 RCC1LQ96I51 464 aaKnown RBP5.64□□□□□ -1.51
CSTF1-205ENST00000490539 KAZALD1Q96I82 304 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 FGD4Q96M96 766 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 NEUROD6Q96NK8 337 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 KLHL25Q9H0H3 589 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 CD209Q9NNX6 404 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 ERVK13-1Q9NX77 482 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.64□□□□□ -1.51
CSTF1-205ENST00000490539 EBF1Q9UH73 591 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 AKT3Q9Y243 479 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 GPR55Q9Y2T6 319 aaPredicted RBP5.64□□□□□ -1.51
CSTF1-205ENST00000490539 RIPOR2Q9Y4F9 1068 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 MAST3O60307 1309 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 SCN4AP35499 1836 aa5.64□□□□□ -1.51
CSTF1-205ENST00000490539 BAHCC1Q9P281 2608 aa5.63□□□□□ -1.51
CSTF1-205ENST00000490539 LRRC37AA6NMS7 1700 aa5.63□□□□□ -1.51
CSTF1-205ENST00000490539 CEP290O15078 2479 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms