RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 TET1Q8NFU7 2136 aa19.4■□□□□ 0.7
ERCC3-207ENST00000490062 A0A087WWV3 80 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 A0A1W2PQ27 194 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 A0A1W2PQ64 194 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 A0A1W2PQD8 194 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 NCLP19338 710 aaKnown RBP19.39■□□□□ 0.69
ERCC3-207ENST00000490062 CMA1P23946 247 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 GUCY2CP25092 1073 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 MDM2Q00987 491 aaPredicted RBP19.39■□□□□ 0.69
ERCC3-207ENST00000490062 MXD4Q14582 209 aaPredicted RBP19.39■□□□□ 0.69
ERCC3-207ENST00000490062 PLEKHG4Q58EX7 1191 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 FBXO47Q5MNV8 452 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 RINT1Q6NUQ1 792 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 PSRC1Q6PGN9 363 aaPredicted RBP19.39■□□□□ 0.69
ERCC3-207ENST00000490062 CLEC17AQ6ZS10 378 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 C16orf59Q7L2K0 433 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 IFNLR1Q8IU57 520 aaPredicted RBP19.39■□□□□ 0.69
ERCC3-207ENST00000490062 RAD54LQ92698 747 aa19.39■□□□□ 0.69
ERCC3-207ENST00000490062 SUCLA2Q9P2R7 463 aaPredicted RBP19.39■□□□□ 0.69
ERCC3-207ENST00000490062 A0A1W2PPC1 479 aa19.38■□□□□ 0.69
ERCC3-207ENST00000490062 USO1O60763 962 aaKnown RBP19.38■□□□□ 0.69
ERCC3-207ENST00000490062 VTNP04004 478 aa19.38■□□□□ 0.69
ERCC3-207ENST00000490062 CTSHP09668 335 aa19.38■□□□□ 0.69
ERCC3-207ENST00000490062 PLA2G4BP0C869 781 aa19.38■□□□□ 0.69
ERCC3-207ENST00000490062 E2F4Q16254 413 aa19.38■□□□□ 0.69
ERCC3-207ENST00000490062 TSHZ1Q6ZSZ6 1077 aa19.38■□□□□ 0.69
ERCC3-207ENST00000490062 LARP4BQ92615 738 aaKnown RBP19.38■□□□□ 0.69
ERCC3-207ENST00000490062 PYM1Q9BRP8 204 aaKnown RBP19.38■□□□□ 0.69
ERCC3-207ENST00000490062 NFKBIZQ9BYH8 718 aa19.38■□□□□ 0.69
ERCC3-207ENST00000490062 CUEDC2Q9H467 287 aa19.38■□□□□ 0.69
ERCC3-207ENST00000490062 AKT3Q9Y243 479 aa19.38■□□□□ 0.69
ERCC3-207ENST00000490062 COL4A3BPQ9Y5P4 624 aa19.38■□□□□ 0.69
ERCC3-207ENST00000490062 A0A087X0B3 334 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 EPHB4P54760 987 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 NLRP11P59045 1033 aaKnown RBP19.37■□□□□ 0.69
ERCC3-207ENST00000490062 LPIN1Q14693 890 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 TMEM240Q5SV17 173 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 RASIP1Q5U651 963 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 RRAGBQ5VZM2 374 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 PRPF31Q8WWY3 499 aaKnown RBP19.37■□□□□ 0.69
ERCC3-207ENST00000490062 KIFAP3Q92845 792 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 APBB2Q92870 758 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 TMEM143Q96AN5 459 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 C17orf75Q9HAS0 396 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 FAM13BQ9NYF5 915 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 HPSEQ9Y251 543 aa19.37■□□□□ 0.69
ERCC3-207ENST00000490062 EIF4BP23588 611 aaKnown RBP19.36■□□□□ 0.69
ERCC3-207ENST00000490062 LAMTOR4Q0VGL1 99 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 MAPK7Q13164 816 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 ZRSR1Q15695 479 aaKnown RBP19.36■□□□□ 0.69
ERCC3-207ENST00000490062 KIZQ2M2Z5 673 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 ODR4Q5SWX8 454 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 CNKSR3Q6P9H4 555 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 TMEM87AQ8NBN3 555 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 RASSF8Q8NHQ8 419 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 TMEM40Q8WWA1 233 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 KCNN1Q92952 543 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 RUSC1Q9BVN2 902 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 MAGEF1Q9HAY2 307 aa19.36■□□□□ 0.69
ERCC3-207ENST00000490062 EFCAB14O75071 495 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 BAIAP3O94812 1187 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 DARSP14868 501 aaKnown RBP19.35■□□□□ 0.69
ERCC3-207ENST00000490062 GLRA2P23416 452 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 PCBP1Q15365 356 aaKnown RBP eCLIP19.35■□□□□ 0.69
ERCC3-207ENST00000490062 CSPP1Q1MSJ5 1256 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 ARSHQ5FYA8 562 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 RHPN2Q8IUC4 686 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 DAW1Q8N136 415 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 IQUBQ8NA54 791 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 HERVK_113Q902F9 699 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 PLIN2Q99541 437 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.35■□□□□ 0.692e-6■■■□□ 14.9
ERCC3-207ENST00000490062 OSBPL7Q9BZF2 842 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 INO80BQ9C086 356 aaPredicted RBP19.35■□□□□ 0.69
ERCC3-207ENST00000490062 CDHR5Q9HBB8 845 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 IFT122Q9HBG6 1241 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 ODF2LQ9ULJ1 636 aa19.35■□□□□ 0.69
ERCC3-207ENST00000490062 FGBP02675 491 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 GHRP10912 638 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 STAT6P42226 847 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 PTENP60484 403 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 TMEM62Q0P6H9 643 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 TFDP1Q14186 410 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 MCM6Q14566 821 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 PPP2R5AQ15172 486 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 CNNM4Q6P4Q7 775 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 ZNF365Q70YC5 407 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 SRGAP1Q7Z6B7 1085 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 DBF4BQ8NFT6 615 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 ASAP3Q8TDY4 903 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 SEPT8Q92599 483 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 DRC1Q96MC2 740 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 OSMRQ99650 979 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 IFIH1Q9BYX4 1025 aaKnown RBP19.34■□□□□ 0.69
ERCC3-207ENST00000490062 GCOM2Q9BZD3 368 aaPredicted RBP19.34■□□□□ 0.69
ERCC3-207ENST00000490062 UBE2OQ9C0C9 1292 aaKnown RBP19.34■□□□□ 0.69
ERCC3-207ENST00000490062 POLR3FQ9H1D9 316 aaPredicted RBP19.34■□□□□ 0.69
ERCC3-207ENST00000490062 AGO3Q9H9G7 860 aaKnown RBP19.34■□□□□ 0.69
ERCC3-207ENST00000490062 GDPD2Q9HCC8 539 aa19.34■□□□□ 0.69
ERCC3-207ENST00000490062 ERVK-5Q9HDB9 667 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms