RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 ADALQ6DHV7 355 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 PSRC1Q6PGN9 363 aaPredicted RBP12.08□□□□□ -0.48
VPS13D-210ENST00000489961 SHC4Q6S5L8 630 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 ZNF410Q86VK4 478 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 RHPN2Q8IUC4 686 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
VPS13D-210ENST00000489961 USP38Q8NB14 1042 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 NLRP7Q8WX94 980 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 LARP4BQ92615 738 aaKnown RBP12.08□□□□□ -0.48
VPS13D-210ENST00000489961 RAD54LQ92698 747 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 PPP1R16BQ96T49 567 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 GDPD2Q9HCC8 539 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 XPNPEP1Q9NQW7 623 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 COL4A3BPQ9Y5P4 624 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 SQORQ9Y6N5 450 aa12.08□□□□□ -0.48
VPS13D-210ENST00000489961 NBNO60934 754 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 GPR32O75388 356 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 FGBP02675 491 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 CXCL10P02778 98 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 ACRP10323 421 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 GHRP10912 638 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 BMP8BP34820 402 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 SLC12A3P55017 1021 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 LAMTOR4Q0VGL1 99 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 TFDP1Q14186 410 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 MBTPS1Q14703 1052 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 GPNMBQ14956 572 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 FBXO47Q5MNV8 452 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 ODR4Q5SWX8 454 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 FAM102BQ5T8I3 360 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 RESP18Q5W5W9 173 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 RINT1Q6NUQ1 792 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 CNKSR3Q6P9H4 555 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 CHRDL2Q6WN34 429 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 TSHZ1Q6ZSZ6 1077 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 MAEAQ7L5Y9 396 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 PDILTQ8N807 584 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 PRPF31Q8WWY3 499 aaKnown RBP12.07□□□□□ -0.48
VPS13D-210ENST00000489961 SEPT8Q92599 483 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 NLRP4Q96MN2 994 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 OSMRQ99650 979 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 PYM1Q9BRP8 204 aaKnown RBP12.07□□□□□ -0.48
VPS13D-210ENST00000489961 TIPINQ9BVW5 301 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 PANK2Q9BZ23 570 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 GCOM2Q9BZD3 368 aaPredicted RBP12.07□□□□□ -0.48
VPS13D-210ENST00000489961 POLR3FQ9H1D9 316 aaPredicted RBP12.07□□□□□ -0.48
VPS13D-210ENST00000489961 ADAMTS10Q9H324 1103 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 KCND2Q9NZV8 630 aa12.07□□□□□ -0.48
VPS13D-210ENST00000489961 A0A087WZ62 844 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 GOLGA6L4A6NEF3 574 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 CMA1P23946 247 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 GUCY2CP25092 1073 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 ARL2P36404 184 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 EPHB4P54760 987 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 DHX8Q14562 1220 aaKnown RBP12.06□□□□□ -0.48
VPS13D-210ENST00000489961 MCM6Q14566 821 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 LPIN1Q14693 890 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 PPP2R5AQ15172 486 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 PLEKHG4Q58EX7 1191 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 TMEM240Q5SV17 173 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 C1orf186Q6ZWK4 172 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 ZNF365Q70YC5 407 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 GPBP1Q86WP2 473 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 KSR1Q8IVT5 923 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 IQUBQ8NA54 791 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 KIFAP3Q92845 792 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 APBB2Q92870 758 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 ZNF668Q96K58 619 aaPredicted RBP12.06□□□□□ -0.48
VPS13D-210ENST00000489961 DRC1Q96MC2 740 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.06□□□□□ -0.485e-9■□□□□ 10.6
VPS13D-210ENST00000489961 FDXACB1Q9BRP7 624 aaPredicted RBP12.06□□□□□ -0.48
VPS13D-210ENST00000489961 IFIH1Q9BYX4 1025 aaKnown RBP12.06□□□□□ -0.48
VPS13D-210ENST00000489961 INO80BQ9C086 356 aaPredicted RBP12.06□□□□□ -0.48
VPS13D-210ENST00000489961 MTIF3Q9H2K0 278 aaKnown RBP12.06□□□□□ -0.48
VPS13D-210ENST00000489961 CUEDC2Q9H467 287 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 CDHR5Q9HBB8 845 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 GPRC5CQ9NQ84 441 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 MYH11P35749 1972 aa12.06□□□□□ -0.48
VPS13D-210ENST00000489961 A0A087X0B3 334 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 A0A1W2PQ27 194 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 A0A1W2PQ64 194 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 A0A1W2PQD8 194 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 GPR182O15218 404 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 HIP1RO75146 1068 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 RPS6KA5O75582 802 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 KRT18P05783 430 aaKnown RBP12.05□□□□□ -0.48
VPS13D-210ENST00000489961 SRGAP2CP0DJJ0 459 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 DARSP14868 501 aaKnown RBP12.05□□□□□ -0.48
VPS13D-210ENST00000489961 GLRA2P23416 452 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 EIF4BP23588 611 aaKnown RBP12.05□□□□□ -0.48
VPS13D-210ENST00000489961 PHKA2P46019 1235 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 POU5F1BQ06416 359 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 PAK2Q13177 524 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 IKBKEQ14164 716 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 FAM43BQ6ZT52 329 aaPredicted RBP12.05□□□□□ -0.48
VPS13D-210ENST00000489961 SV2BQ7L1I2 683 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 C16orf59Q7L2K0 433 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 RNF149Q8NC42 400 aa12.05□□□□□ -0.48
VPS13D-210ENST00000489961 DBF4BQ8NFT6 615 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms