RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 HLA-CQ95604 372 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 DYDC2Q96IM9 177 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 SH2D3AQ9BRG2 576 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 RAB34Q9BZG1 259 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 ERVK-5Q9HDB9 667 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 DACT1Q9NYF0 836 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 PCDHB12Q9Y5F1 795 aa10.2□□□□□ -0.78
HDAC6-232ENST00000489053 TMEM150BA6NC51 233 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 H3BNC9 293 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 EDIL3O43854 480 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 GPR32O75388 356 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 DGKIO75912 1065 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 OR52Z1P0C646 297 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 DARSP14868 501 aaKnown RBP10.19□□□□□ -0.78
HDAC6-232ENST00000489053 POU3F3P20264 500 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-232ENST00000489053 BMPR1AP36894 532 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 GPC3P51654 580 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-232ENST00000489053 EMC2Q15006 297 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 TTC38Q5R3I4 469 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 TWF2Q6IBS0 349 aaKnown RBP10.19□□□□□ -0.78
HDAC6-232ENST00000489053 SPRED2Q7Z698 418 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 FBXO18Q8NFZ0 1043 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 TMEM40Q8WWA1 233 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 PSPC1Q8WXF1 523 aaKnown RBP10.19□□□□□ -0.78
HDAC6-232ENST00000489053 HAS1Q92839 578 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 MRPL38Q96DV4 380 aaKnown RBP10.19□□□□□ -0.78
HDAC6-232ENST00000489053 EIF2AK1Q9BQI3 630 aaKnown RBP10.19□□□□□ -0.78
HDAC6-232ENST00000489053 PLVAPQ9BX97 442 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 CDHR5Q9HBB8 845 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 RGS18Q9NS28 235 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 BMP2KQ9NSY1 1161 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-232ENST00000489053 RGL1Q9NZL6 768 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 SMC3Q9UQE7 1217 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 PIN4Q9Y237 131 aaKnown RBP10.19□□□□□ -0.78
HDAC6-232ENST00000489053 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-232ENST00000489053 COL4A3BPQ9Y5P4 624 aa10.19□□□□□ -0.78
HDAC6-232ENST00000489053 ERLIN2O94905 339 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 SRGAP2CP0DJJ0 459 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 SKIP12755 728 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 PHKA2P46019 1235 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 TRAPPC10P48553 1259 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 NPEPPSP55786 919 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 TFDP1Q14186 410 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 TARBP2Q15633 366 aaKnown RBP10.18□□□□□ -0.78
HDAC6-232ENST00000489053 ZNF174Q15697 407 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 CSPP1Q1MSJ5 1256 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 TMEM132AQ24JP5 1023 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 HAUS3Q68CZ6 603 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 B3GNT9Q6UX72 402 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 ANO5Q75V66 913 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 C4orf19Q8IY42 314 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 MICAL1Q8TDZ2 1067 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 LINC01599Q8WXQ3 324 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 TNFRSF25Q93038 417 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 TMEM143Q96AN5 459 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 ASB2Q96Q27 587 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 MTRQ99707 1265 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 LMAN2LQ9H0V9 348 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 ADAMTS10Q9H324 1103 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 TMX1Q9H3N1 280 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 PRDM6Q9NQX0 595 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 TMEM161AQ9NX61 479 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 STK24Q9Y6E0 443 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 BDP1A6H8Y1 2624 aa10.18□□□□□ -0.78
HDAC6-232ENST00000489053 A0A087WZ62 844 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 ASAP2O43150 1006 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 NCK2O43639 380 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 LPXNO60711 386 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 TECP42680 631 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 MXD4Q14582 209 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-232ENST00000489053 NAALADL2Q58DX5 795 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 RTN4RL1Q86UN2 441 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-232ENST00000489053 THNSL1Q8IYQ7 743 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 LRRC43Q8N309 656 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 LINC01465Q8N7H1 131 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 TMEM87AQ8NBN3 555 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 PRPF31Q8WWY3 499 aaKnown RBP10.17□□□□□ -0.78
HDAC6-232ENST00000489053 FDXACB1Q9BRP7 624 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-232ENST00000489053 COL25A1Q9BXS0 654 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-232ENST00000489053 MRPL9Q9BYD2 267 aaKnown RBP10.17□□□□□ -0.78
HDAC6-232ENST00000489053 TMEM117Q9H0C3 514 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 NSUN3Q9H649 340 aaKnown RBP10.17□□□□□ -0.78
HDAC6-232ENST00000489053 ELAC1Q9H777 363 aaKnown RBP10.17□□□□□ -0.78
HDAC6-232ENST00000489053 CHST12Q9NRB3 414 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 ANKEF1Q9NU02 776 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 PUF60Q9UHX1 559 aaKnown RBP10.17□□□□□ -0.78
HDAC6-232ENST00000489053 FAM50BQ9Y247 325 aa10.17□□□□□ -0.78
HDAC6-232ENST00000489053 MRPL42Q9Y6G3 142 aaKnown RBP10.17□□□□□ -0.78
HDAC6-232ENST00000489053 ARHGEF35A5YM69 484 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 POTEMA6NI47 508 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 C5orf67F2Z3F1 127 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 RBAK-RBAKDNI3L0D1 243 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 INO80B-WBP1J3KQ70 363 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 MGEA5O60502 916 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 CSDE1O75534 798 aaKnown RBP10.16□□□□□ -0.78
HDAC6-232ENST00000489053 DGAT1O75907 488 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 FGFR1P11362 822 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 LAG3P18627 525 aa10.16□□□□□ -0.78
HDAC6-232ENST00000489053 FGFR4P22455 802 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms