RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 WNK4Q96J92 1243 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 MAGEB10Q96LZ2 347 aaPredicted RBP4.13□□□□□ -1.75
PRPF4-203ENST00000488937 ISCA1Q9BUE6 129 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 PRDM14Q9GZV8 571 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 RNF38Q9H0F5 515 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 RSPH9Q9H1X1 276 aaPredicted RBP4.13□□□□□ -1.75
PRPF4-203ENST00000488937 IFT122Q9HBG6 1241 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 SLC45A1Q9Y2W3 748 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 RABGAP1Q9Y3P9 1069 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 RPGRIP1LQ68CZ1 1315 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 WDR33Q9C0J8 1336 aaKnown RBP4.13□□□□□ -1.75
PRPF4-203ENST00000488937 TMEM82A0PJX8 343 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 FAM86C2PA6NEL3 165 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 F5H423 210 aaPredicted RBP4.12□□□□□ -1.75
PRPF4-203ENST00000488937 SIGLEC6O43699 453 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 NOBOXO60393 691 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 AGR2O95994 175 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 CFBP00751 764 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 HSD3B1P14060 373 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 HTRA3P83110 453 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 ZNF200P98182 395 aaPredicted RBP4.12□□□□□ -1.75
PRPF4-203ENST00000488937 MAP4K2Q12851 820 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 AUHQ13825 339 aaKnown RBP4.12□□□□□ -1.75
PRPF4-203ENST00000488937 SLC9A5Q14940 896 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 ATP13A4Q4VNC1 1196 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 MZT2BQ6NZ67 158 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 CFAP161Q6P656 301 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 OTOP3Q7RTS5 596 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 TMC3Q7Z5M5 1100 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 CATIPQ7Z7H3 387 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 RASSF3Q86WH2 238 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 SLC41A1Q8IVJ1 513 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 TRIM59Q8IWR1 403 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 C7orf61Q8IZ16 206 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 CLRN3Q8NCR9 226 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 BVESQ8NE79 360 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 NUP43Q8NFH3 380 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 VOPP1Q96AW1 172 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 PGBD4Q96DM1 585 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 C1orf159Q96HA4 380 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 AHCYL2Q96HN2 611 aaKnown RBP4.12□□□□□ -1.75
PRPF4-203ENST00000488937 TTC14Q96N46 770 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 LGR4Q9BXB1 951 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 PDLIM7Q9NR12 457 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 RASSF1Q9NS23 344 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 LRP2BPQ9P2M1 347 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 ACSL6Q9UKU0 697 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 GPR52Q9Y2T5 361 aa4.12□□□□□ -1.75
PRPF4-203ENST00000488937 GPR55Q9Y2T6 319 aaPredicted RBP4.12□□□□□ -1.75
PRPF4-203ENST00000488937 A0A1W2PQ27 194 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 A0A1W2PQ64 194 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 A0A1W2PQC6 194 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 A0A1W2PQD8 194 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 hCG_1984214I3L0E3 225 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 TRAF5O00463 557 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 ANP32CO43423 234 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 SNX2O60749 519 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 FKTNO75072 461 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 GLRX3O76003 335 aaKnown RBP4.11□□□□□ -1.75
PRPF4-203ENST00000488937 PRAMEF1O95521 474 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 CRTAMO95727 393 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 PLATP00750 562 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 AMHP03971 560 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 SCG5P05408 212 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 SYPP08247 313 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 TNFAIP3P21580 790 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 GRK6P43250 576 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 GFRA1P56159 465 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 SESN3P58005 492 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 IL2P60568 153 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 FOXO4P98177 505 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 C1QTNF12Q5T7M4 302 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 CREB3L3Q68CJ9 461 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 TTLL5Q6EMB2 1281 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 STYK1Q6J9G0 422 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 TLDC1Q6P9B6 456 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 SKAP1Q86WV1 359 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 CARFQ8N187 725 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 NXPE1Q8N323 547 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 DEPTORQ8TB45 409 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 RCC1LQ96I51 464 aaKnown RBP4.11□□□□□ -1.75
PRPF4-203ENST00000488937 LRGUKQ96M69 825 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 PPM1MQ96MI6 270 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 FAM193BQ96PV7 902 aaPredicted RBP4.11□□□□□ -1.75
PRPF4-203ENST00000488937 CDK5RAP1Q96SZ6 601 aaKnown RBP4.11□□□□□ -1.75
PRPF4-203ENST00000488937 WDR12Q9GZL7 423 aaKnown RBP4.11□□□□□ -1.75
PRPF4-203ENST00000488937 MKRN2Q9H000 416 aaKnown RBP4.11□□□□□ -1.75
PRPF4-203ENST00000488937 OSBPL5Q9H0X9 879 aaPredicted RBP4.11□□□□□ -1.75
PRPF4-203ENST00000488937 AGO4Q9HCK5 861 aaKnown RBP4.11□□□□□ -1.75
PRPF4-203ENST00000488937 SPTLC3Q9NUV7 552 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 SAMD15Q9P1V8 674 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 PDP2Q9P2J9 529 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 NOL7Q9UMY1 257 aaKnown RBP4.11□□□□□ -1.75
PRPF4-203ENST00000488937 EMC9Q9Y3B6 208 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 PCDHB12Q9Y5F1 795 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 ASXL2Q76L83 1435 aa4.11□□□□□ -1.75
PRPF4-203ENST00000488937 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.1□□□□□ -1.75
PRPF4-203ENST00000488937 BLACEA4D250 179 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 RASA4BC9J798 803 aa4.1□□□□□ -1.75
PRPF4-203ENST00000488937 J3KRW8 73 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms