RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 COL4A3BPQ9Y5P4 624 aa17.73■□□□□ 0.43
HDAC7-224ENST00000488927 GPR32O75388 356 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 CXCL10P02778 98 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 GUCY2CP25092 1073 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 GPC3P51654 580 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 SLC12A3P55017 1021 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 NLRP11P59045 1033 aaKnown RBP17.72■□□□□ 0.43
HDAC7-224ENST00000488927 TMEM62Q0P6H9 643 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 DRP2Q13474 957 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 TFDP1Q14186 410 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 PRPF38BQ5VTL8 546 aaKnown RBP17.72■□□□□ 0.43
HDAC7-224ENST00000488927 RINT1Q6NUQ1 792 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 RHPN2Q8IUC4 686 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 PRPF31Q8WWY3 499 aaKnown RBP17.72■□□□□ 0.43
HDAC7-224ENST00000488927 NLRP7Q8WX94 980 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 KIFAP3Q92845 792 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 SCLT1Q96NL6 688 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 GDF15Q99988 308 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 GDPD2Q9HCC8 539 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 BMP2KQ9NSY1 1161 aaPredicted RBP17.72■□□□□ 0.43
HDAC7-224ENST00000488927 BLOC1S4Q9NUP1 217 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 KCNG1Q9UIX4 513 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 PDE4DIPQ5VU43 2346 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 LOXHD1Q8IVV2 1947 aa17.72■□□□□ 0.43
HDAC7-224ENST00000488927 LTBP2Q14767 1821 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 ACTN1P12814 892 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 BMP8BP34820 402 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 ARL2P36404 184 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 POU5F1BQ06416 359 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 LAMTOR4Q0VGL1 99 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 PPP2R5AQ15172 486 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 KIZQ2M2Z5 673 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 FBXO47Q5MNV8 452 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 FAM102BQ5T8I3 360 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 TSHZ1Q6ZSZ6 1077 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 C1orf186Q6ZWK4 172 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 SV2BQ7L1I2 683 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 PDILTQ8N807 584 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 APBB2Q92870 758 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 DRC1Q96MC2 740 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 GCOM2Q9BZD3 368 aaPredicted RBP17.71■□□□□ 0.43
HDAC7-224ENST00000488927 INO80BQ9C086 356 aaPredicted RBP17.71■□□□□ 0.43
HDAC7-224ENST00000488927 LRRC27Q9C0I9 530 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 POLR3FQ9H1D9 316 aaPredicted RBP17.71■□□□□ 0.43
HDAC7-224ENST00000488927 ADAMTS10Q9H324 1103 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 C17orf75Q9HAS0 396 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 MAGEF1Q9HAY2 307 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 KCNH3Q9ULD8 1083 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 GINS2Q9Y248 185 aa17.71■□□□□ 0.43
HDAC7-224ENST00000488927 TANC1Q9C0D5 1861 aa17.7■□□□□ 0.42
HDAC7-224ENST00000488927 NBNO60934 754 aa17.7■□□□□ 0.42
HDAC7-224ENST00000488927 MBTPS1Q14703 1052 aa17.7■□□□□ 0.42
HDAC7-224ENST00000488927 DEFB128Q7Z7B8 93 aa17.7■□□□□ 0.42
HDAC7-224ENST00000488927 SEPT8Q92599 483 aa17.7■□□□□ 0.42
HDAC7-224ENST00000488927 PANK2Q9BZ23 570 aa17.7■□□□□ 0.42
HDAC7-224ENST00000488927 UBE2OQ9C0C9 1292 aaKnown RBP17.7■□□□□ 0.42
HDAC7-224ENST00000488927 MTIF3Q9H2K0 278 aaKnown RBP17.7■□□□□ 0.42
HDAC7-224ENST00000488927 USP25Q9UHP3 1055 aa17.7■□□□□ 0.42
HDAC7-224ENST00000488927 ARID2Q68CP9 1835 aa17.7■□□□□ 0.42
HDAC7-224ENST00000488927 FAM237AA0A1B0GTK4 181 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 GPR182O15218 404 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 EFCAB14O75071 495 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 GHRP10912 638 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 EIF4BP23588 611 aaKnown RBP17.69■□□□□ 0.42
HDAC7-224ENST00000488927 PHKA2P46019 1235 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 AMPD3Q01432 767 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 MCM6Q14566 821 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 LPIN1Q14693 890 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 GPNMBQ14956 572 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 PCBP1Q15365 356 aaKnown RBP eCLIP17.69■□□□□ 0.42
HDAC7-224ENST00000488927 E2F4Q16254 413 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 PLEKHG4Q58EX7 1191 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 CNKSR3Q6P9H4 555 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 MAEAQ7L5Y9 396 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 GPBP1Q86WP2 473 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 MRPS27Q92552 414 aaKnown RBP17.69■□□□□ 0.42
HDAC7-224ENST00000488927 IFT74Q96LB3 600 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 NLRP4Q96MN2 994 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 OSMRQ99650 979 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 RUSC1Q9BVN2 902 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 IFIH1Q9BYX4 1025 aaKnown RBP17.69■□□□□ 0.42
HDAC7-224ENST00000488927 TNMDQ9H2S6 317 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 ODF2LQ9ULJ1 636 aa17.69■□□□□ 0.42
HDAC7-224ENST00000488927 A0A087WZ62 844 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 A0A087X0B3 334 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 POLR2DO15514 142 aaKnown RBP17.68■□□□□ 0.42
HDAC7-224ENST00000488927 RPS6KA5O75582 802 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 BAIAP3O94812 1187 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 FGBP02675 491 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 KRT18P05783 430 aaKnown RBP17.68■□□□□ 0.42
HDAC7-224ENST00000488927 DARSP14868 501 aaKnown RBP17.68■□□□□ 0.42
HDAC7-224ENST00000488927 PFKFB1P16118 471 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 PAK2Q13177 524 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 CLEC17AQ6ZS10 378 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 SRGAP1Q7Z6B7 1085 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 CEP57L1Q8IYX8 460 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 TMEM87AQ8NBN3 555 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 RNF149Q8NC42 400 aa17.68■□□□□ 0.42
HDAC7-224ENST00000488927 LRRC15Q8TF66 581 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms