RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 CCDC88AQ3V6T2 1871 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 POTEFA5A3E0 1075 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 RNASELQ05823 741 aaKnown RBP15.37■□□□□ 0.05
COL16A1-214ENST00000488128 BIRC2Q13490 618 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 IFI16Q16666 785 aaKnown RBP15.37■□□□□ 0.05
COL16A1-214ENST00000488128 RC3H1Q5TC82 1133 aaKnown RBP15.37■□□□□ 0.05
COL16A1-214ENST00000488128 NUGGCQ68CJ6 796 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 POTEGQ6S5H5 508 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 POTEEQ6S8J3 1075 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 PALB2Q86YC2 1186 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 LBHD1Q9BQE6 289 aaPredicted RBP15.37■□□□□ 0.05
COL16A1-214ENST00000488128 ERP44Q9BS26 406 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 RAB34Q9BZG1 259 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 PABPC3Q9H361 631 aaKnown RBP15.37■□□□□ 0.05
COL16A1-214ENST00000488128 KCTD10Q9H3F6 313 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 SLITRK6Q9H5Y7 841 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 TAS2R14Q9NYV8 317 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 IRS2Q9Y4H2 1338 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 PLA2G4BP0C869 781 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 RARAP10276 462 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 MMP13P45452 471 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 KCNJ1P48048 391 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 MARCKSL1P49006 195 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 NCALDP61601 193 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 POU5F1Q01860 360 aaKnown RBP15.36■□□□□ 0.05
COL16A1-214ENST00000488128 MAP2K1Q02750 393 aaPredicted RBP15.36■□□□□ 0.05
COL16A1-214ENST00000488128 FAM196AQ6ZSG2 479 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 ALG3Q92685 438 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 HAS1Q92839 578 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 ARHGEF26Q96DR7 871 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 EBF2Q9HAK2 575 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 KCNK9Q9NPC2 374 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 ZDHHC18Q9NUE0 388 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 GCNT4Q9P109 453 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 CTNNAL1Q9UBT7 734 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 DDX25Q9UHL0 483 aaKnown RBP15.36■□□□□ 0.05
COL16A1-214ENST00000488128 A0A1B0GUL6 1792 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 SCN7AQ01118 1682 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 AKAP3O75969 853 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 ACSL3O95573 720 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 NQO1P15559 274 aaKnown RBP15.36■□□□□ 0.05
COL16A1-214ENST00000488128 SLC16A2P36021 539 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 FXR2P51116 673 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL16A1-214ENST00000488128 TNIP1Q15025 636 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 VPS72Q15906 364 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 TRAPPC3LQ5T215 181 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 JAMLQ86YT9 394 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 ZBTB10Q96DT7 871 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 HOOK2Q96ED9 719 aa15.36■□□□□ 0.05
COL16A1-214ENST00000488128 CLSTN1O94985 981 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 GH1P01241 217 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 XRCC5P13010 732 aaKnown RBP15.35■□□□□ 0.05
COL16A1-214ENST00000488128 PSMC6P62333 389 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 PSMD2Q13200 908 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 PABPC4Q13310 644 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL16A1-214ENST00000488128 CCDC65Q8IXS2 484 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 CNBD1Q8NA66 436 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 POP1Q99575 1024 aaKnown RBP15.35■□□□□ 0.05
COL16A1-214ENST00000488128 STXBP5LQ9Y2K9 1186 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 COL5A3P25940 1745 aaPredicted RBP15.35■□□□□ 0.05
COL16A1-214ENST00000488128 RPTORQ8N122 1335 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 EVI5O60447 810 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 RPL21P46778 160 aaKnown RBP15.35■□□□□ 0.05
COL16A1-214ENST00000488128 KLRC3Q07444 240 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 GRAPQ13588 217 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 ZDHHC24Q6UX98 284 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 LNX1Q8TBB1 728 aaPredicted RBP15.35■□□□□ 0.05
COL16A1-214ENST00000488128 WDR66Q8TBY9 1149 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 GRAPLQ8TC17 118 aaPredicted RBP15.35■□□□□ 0.05
COL16A1-214ENST00000488128 HES6Q96HZ4 224 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 RAB17Q9H0T7 212 aa15.35■□□□□ 0.05
COL16A1-214ENST00000488128 SUCLA2Q9P2R7 463 aaPredicted RBP15.35■□□□□ 0.05
COL16A1-214ENST00000488128 CCDC169A6NNP5 214 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 RSPH10B2B2RC85 870 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 ANKRD63C9JTQ0 380 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 AFPP02771 609 aaKnown RBP15.34■□□□□ 0.05
COL16A1-214ENST00000488128 RSPH10BP0C881 870 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 ADCY7P51828 1080 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 GPSM2P81274 684 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 ARHGAP44Q17R89 818 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 KIAA1755Q5JYT7 1200 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 DUPD1Q68J44 220 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 CEP63Q96MT8 703 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 DDX23Q9BUQ8 820 aaKnown RBP15.34■□□□□ 0.05
COL16A1-214ENST00000488128 NOP53Q9NZM5 478 aaKnown RBP15.34■□□□□ 0.05
COL16A1-214ENST00000488128 TBK1Q9UHD2 729 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 EP400Q96L91 3159 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 ASAP2O43150 1006 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 SNX3O60493 162 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 LRRN2O75325 713 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 BAG3O95817 575 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 EIF3BP55884 814 aaKnown RBP15.34■□□□□ 0.05
COL16A1-214ENST00000488128 TMEM119Q4V9L6 283 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 CAPRIN2Q6IMN6 1127 aaKnown RBP15.34■□□□□ 0.05
COL16A1-214ENST00000488128 SLC30A10Q6XR72 485 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 CPNE8Q86YQ8 564 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 RASGEF1CQ8N431 466 aa15.34■□□□□ 0.05
COL16A1-214ENST00000488128 EIF1ADQ8N9N8 165 aaKnown RBP15.34■□□□□ 0.05
COL16A1-214ENST00000488128 PARD3BQ8TEW8 1205 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms