RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 C8orf76Q96K31 380 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 SAMD11Q96NU1 681 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 GZF1Q9H116 711 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 NSUN3Q9H649 340 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 AZI2Q9H6S1 392 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 NCOA5Q9HCD5 579 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 IGSF9BQ9UPX0 1349 aa10.58□□□□□ -0.72
TMEM39A-208ENST00000486159 WDR81Q562E7 1941 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 PI4K2BG5E9Z4 385 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 BACH1O14867 736 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 TBX10O75333 385 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 FOSP01100 380 aaPredicted RBP10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 VTNP04004 478 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 ITGB1P05556 798 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 C7P10643 843 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 SCG2P13521 617 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 FDPSP14324 419 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 PLCB2Q00722 1185 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 KRT76Q01546 638 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 SSRP1Q08945 709 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 PAK2Q13177 524 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 TRIM29Q14134 588 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 COL19A1Q14993 1142 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 IER5Q5VY09 327 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 PPP1R18Q6NYC8 613 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 CAVIN1Q6NZI2 390 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 KLHL23Q8NBE8 558 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 SPPL3Q8TCT6 385 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 LENG9Q96B70 501 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 PABPC5Q96DU9 382 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 ERVK-5Q9HDB9 667 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 VPS54Q9P1Q0 977 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 PLAGL2Q9UPG8 496 aa10.57□□□□□ -0.72
TMEM39A-208ENST00000486159 FNDC1Q4ZHG4 1894 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 SMIM35A0A1B0GVV1 85 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 IPO5O00410 1097 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 PRPF3O43395 683 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 C22orf31O95567 290 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 CYP3A4P08684 503 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 SSTR3P32745 418 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 CLCN3P51790 818 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 UGCGQ16739 394 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 KIZQ2M2Z5 673 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 CTC1Q2NKJ3 1217 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 ZSCAN23Q3MJ62 389 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 TIGD5Q53EQ6 642 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 PRR16Q569H4 304 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 PDXDC2PQ6P474 469 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 ATP8B4Q8TF62 1192 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 SPATA32Q96LK8 384 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 AIFM3Q96NN9 605 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 OSMRQ99650 979 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 ADAM2Q99965 735 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 ZNF577Q9BSK1 485 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 C1QTNF1Q9BXJ1 281 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 SLC26A6Q9BXS9 759 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 ZMYND12Q9H0C1 365 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 ZNF302Q9NR11 478 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 ST3GAL5Q9UNP4 418 aa10.56□□□□□ -0.72
TMEM39A-208ENST00000486159 TMEM150BA6NC51 233 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 GOLGA6L4A6NEF3 574 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 ZNF862O60290 1169 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 HBP1O60381 514 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 GPR32O75388 356 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 CSDE1O75534 798 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 DEXIO95424 95 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 RB1P06400 928 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 FGFR1P11362 822 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 FGFR4P22455 802 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 ZP2Q05996 745 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 AP3B2Q13367 1082 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 TMEM31Q5JXX7 168 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 CCDC183Q5T5S1 534 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 NIPA1Q7RTP0 329 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 RBM23Q86U06 439 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 FERMT3Q86UX7 667 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 FAM228AQ86W67 206 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 CKAP2LQ8IYA6 745 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 FAM177A1Q8N128 213 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 LRRC71Q8N4P6 559 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 LEO1Q8WVC0 666 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 POF1BQ8WVV4 589 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 SH2D3AQ9BRG2 576 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 C11orf84Q9BUA3 381 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 RNF26Q9BY78 433 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 RNF19AQ9NV58 838 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 GABBR1Q9UBS5 961 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 RCOR1Q9UKL0 485 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 MYH9P35579 1960 aaKnown RBP10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 KDM3AQ9Y4C1 1321 aa10.55□□□□□ -0.72
TMEM39A-208ENST00000486159 TBKBP1A7MCY6 615 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 M0QZ92 97 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 PER2O15055 1255 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 MSH4O15457 936 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 MBTPS2O43462 519 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 GPR37L1O60883 481 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 RPS6KA5O75582 802 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 MMP1P03956 469 aa10.54□□□□□ -0.72
TMEM39A-208ENST00000486159 XBP1P17861 261 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms