RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 USTQ9Y2C2 406 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 CACNA1BQ00975 2339 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 IGHDP01880 384 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 BCAR1P56945 870 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 TDGQ13569 410 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 CEP55Q53EZ4 464 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 FAM160B1Q5W0V3 765 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 TYW1BQ6NUM6 668 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 SWSAP1Q6NVH7 229 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 PDXDC2PQ6P474 469 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 TRMT1LQ7Z2T5 733 aaKnown RBP12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 HEATR3Q7Z4Q2 680 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 KIAA2013Q8IYS2 634 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 SIX5Q8N196 739 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 METTL13Q8N6R0 699 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 KCNG4Q8TDN1 519 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 ZNF668Q96K58 619 aaPredicted RBP12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 ZBP1Q9H171 429 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 ZNF302Q9NR11 478 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 DZANK1Q9NVP4 752 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 R4GN57 208 aa12.38□□□□□ -0.43
SMARCC1-205ENST00000483847 OTOGLQ3ZCN5 2332 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 MEIS1O00470 390 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 DHX15O43143 795 aaKnown RBP12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 NARSO43776 548 aaKnown RBP12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 GNAQP50148 359 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 CLCN3P51790 818 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 NLRP11P59045 1033 aaKnown RBP12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 DGLUCYQ7Z3D6 616 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 ZNF598Q86UK7 904 aaKnown RBP12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 VPS52Q8N1B4 723 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 BCL7CQ8WUZ0 217 aaPredicted RBP12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 ADAMTS10Q9H324 1103 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 KCNK12Q9HB15 430 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 FBXL21Q9UKT6 434 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 DUSP12Q9UNI6 340 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 C2orf16Q68DN1 1984 aa12.37□□□□□ -0.43
SMARCC1-205ENST00000483847 PRC1O43663 620 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 KRT37O76014 449 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 LMNAP02545 664 aaKnown RBP12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 GSPT1P15170 499 aaKnown RBP12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 ZSCAN20P17040 1043 aaPredicted RBP12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 FGFR4P22455 802 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 ALDH7A1P49419 539 aaKnown RBP12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 NFXL1Q6ZNB6 911 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 GPR149Q86SP6 731 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 CKAP2LQ8IYA6 745 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 TMEM169Q96HH4 297 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 RTP3Q9BQQ7 232 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 VN1R3Q9BXE9 311 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 ANO3Q9BYT9 981 aa12.36□□□□□ -0.43
SMARCC1-205ENST00000483847 A0A0U1RQF3 1178 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 KRBA1A5PL33 1030 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 FAM86B1E9PN63 330 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 SH2B2O14492 632 aaPredicted RBP12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 N4BP1O75113 896 aaKnown RBP12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 ZC3H11AO75152 810 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 CFHP08603 1231 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 FAM86B2P0C5J1 330 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 CTSAP10619 480 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 EIF4BP23588 611 aaKnown RBP12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 MIS18BP1Q6P0N0 1132 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 CCDC149Q6ZUS6 474 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 TMTC3Q6ZXV5 915 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 OTOP3Q7RTS5 596 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 CABP7Q86V35 215 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 LRRC71Q8N4P6 559 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 LINC01465Q8N7H1 131 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 RSAD2Q8WXG1 361 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 BBXQ8WY36 941 aaPredicted RBP12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 RIN2Q8WYP3 895 aaPredicted RBP12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 ACSF2Q96CM8 615 aaPredicted RBP12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 RWDD1Q9H446 243 aaPredicted RBP12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 RIC8AQ9NPQ8 531 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 AKT3Q9Y243 479 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 MAFBQ9Y5Q3 323 aaPredicted RBP12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 IRAK3Q9Y616 596 aa12.35□□□□□ -0.43
SMARCC1-205ENST00000483847 MYH9P35579 1960 aaKnown RBP12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 IGLV3-22A0A075B6J6 115 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 CCDC69A6NI79 296 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 CSDE1O75534 798 aaKnown RBP12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 CHMLP26374 656 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 SREBF1P36956 1147 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 NAPAP54920 295 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 PTPN14Q15678 1187 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 LONRF3Q496Y0 759 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 EFCAB12Q6NXP0 572 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 CASC1Q6TDU7 716 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 DDX53Q86TM3 631 aaKnown RBP12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 DCLK2Q8N568 766 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 LPPQ93052 612 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 IGSF21Q96ID5 467 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 SFXN1Q9H9B4 322 aa12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 TPRP12270 2363 aaKnown RBP12.34□□□□□ -0.43
SMARCC1-205ENST00000483847 GPR179Q6PRD1 2367 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 MEIS3P2A8K0S8 358 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 IPO5O00410 1097 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms