RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 MZB1Q8WU39 189 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 TSPEARQ8WU66 669 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 ZSWIM3Q96MP5 696 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 NOX5Q96PH1 765 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 SLC2A13Q96QE2 648 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 TMEM209Q96SK2 561 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 BTBD2Q9BX70 525 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 PITHD1Q9GZP4 211 aaPredicted RBP6.86□□□□□ -1.31
UPF3A-207ENST00000481131 EPB41L4BQ9H329 900 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 MTG2Q9H4K7 406 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 GCM1Q9NP62 436 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 DCP1AQ9NPI6 582 aaPredicted RBP6.86□□□□□ -1.31
UPF3A-207ENST00000481131 ARHGAP20Q9P2F6 1191 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 INVSQ9Y283 1065 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 ANKRD6Q9Y2G4 727 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 GIT1Q9Y2X7 761 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 NUMBLQ9Y6R0 609 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 MYPNQ86TC9 1320 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 PCDH8O95206 1070 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 LGALS4P56470 323 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 TBX4P57082 545 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 MLC1Q15049 377 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 ZNF124Q15973 351 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 EFCAB2Q5VUJ9 269 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 MAGEB6Q8N7X4 407 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 CALML6Q8TD86 181 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 HSPBAP1Q96EW2 488 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 TACO1Q9BSH4 297 aaKnown RBP6.85□□□□□ -1.31
UPF3A-207ENST00000481131 GABBR1Q9UBS5 961 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 DPP7Q9UHL4 492 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 ZFP69BQ9UJL9 534 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 TUBD1Q9UJT1 453 aa6.85□□□□□ -1.31
UPF3A-207ENST00000481131 ST20-MTHFSA0A0A6YYL1 179 aa6.84□□□□□ -1.31
UPF3A-207ENST00000481131 OPHN1O60890 802 aa6.84□□□□□ -1.31
UPF3A-207ENST00000481131 APEX1P27695 318 aaKnown RBP6.84□□□□□ -1.31
UPF3A-207ENST00000481131 MESP2Q0VG99 397 aa6.84□□□□□ -1.31
UPF3A-207ENST00000481131 MUM1Q2TAK8 710 aa6.84□□□□□ -1.31
UPF3A-207ENST00000481131 CXorf57Q6NSI4 855 aaKnown RBP6.84□□□□□ -1.31
UPF3A-207ENST00000481131 STPG3Q8N7X2 389 aa6.84□□□□□ -1.31
UPF3A-207ENST00000481131 RELTQ969Z4 430 aa6.84□□□□□ -1.31
UPF3A-207ENST00000481131 RAX2Q96IS3 184 aa6.84□□□□□ -1.31
UPF3A-207ENST00000481131 C11orf84Q9BUA3 381 aaPredicted RBP6.84□□□□□ -1.31
UPF3A-207ENST00000481131 KCND1Q9NSA2 647 aa6.84□□□□□ -1.31
UPF3A-207ENST00000481131 PRSS50Q9UI38 385 aa6.84□□□□□ -1.31
UPF3A-207ENST00000481131 ZBTB21Q9ULJ3 1066 aa6.84□□□□□ -1.31
UPF3A-207ENST00000481131 PNMA8BQ9ULN7 279 aaPredicted RBP6.84□□□□□ -1.31
UPF3A-207ENST00000481131 A0A0A6YYJ9 748 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 N4BP3O15049 544 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 CT47B1P0C2W7 299 aaPredicted RBP6.83□□□□□ -1.32
UPF3A-207ENST00000481131 PFKLP17858 780 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 ATF3P18847 181 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 LIMS1P48059 325 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 BCAR1P56945 870 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 FOXO4P98177 505 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 CD83Q01151 205 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 MLANAQ16655 118 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 AUTS2Q8WXX7 1259 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 ANLNQ9NQW6 1124 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 SLC52A1Q9NWF4 448 aa6.83□□□□□ -1.32
UPF3A-207ENST00000481131 GEMIN8Q9NWZ8 242 aaKnown RBP6.83□□□□□ -1.32
UPF3A-207ENST00000481131 NDUFS2O75306 463 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 MAFO75444 373 aaPredicted RBP6.82□□□□□ -1.32
UPF3A-207ENST00000481131 IL33O95760 270 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 COL6A1P12109 1028 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 LPOP22079 712 aaPredicted RBP6.82□□□□□ -1.32
UPF3A-207ENST00000481131 GNALP38405 381 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 PPARAQ07869 468 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 GAREM2Q75VX8 874 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 EPM2AIP1Q7L775 607 aaPredicted RBP6.82□□□□□ -1.32
UPF3A-207ENST00000481131 OR5AN1Q8NGI8 311 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 SSH1Q8WYL5 1049 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 RPGRQ92834 1020 aaKnown RBP6.82□□□□□ -1.32
UPF3A-207ENST00000481131 NUP88Q99567 741 aaPredicted RBP6.82□□□□□ -1.32
UPF3A-207ENST00000481131 HAPLN2Q9GZV7 340 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 IFT122Q9HBG6 1241 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.82□□□□□ -1.32
UPF3A-207ENST00000481131 FTSJ1Q9UET6 329 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 EVLQ9UI08 416 aaPredicted RBP6.82□□□□□ -1.32
UPF3A-207ENST00000481131 SERPINB13Q9UIV8 391 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 USP18Q9UMW8 372 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 CDY2AQ9Y6F7 541 aa6.82□□□□□ -1.32
UPF3A-207ENST00000481131 A0A0A6YYK5 440 aaPredicted RBP6.81□□□□□ -1.32
UPF3A-207ENST00000481131 LRRC10BA6NIK2 292 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 PRC1O43663 620 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 SEMA7AO75326 666 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 PLA2G1BP04054 148 aaKnown RBP6.81□□□□□ -1.32
UPF3A-207ENST00000481131 MTHFD2P13995 350 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 ANTXR2P58335 489 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 CCT2P78371 535 aaKnown RBP6.81□□□□□ -1.32
UPF3A-207ENST00000481131 CDK17Q00537 523 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 NFATC3Q12968 1075 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 SMAD4Q13485 552 aaKnown RBP6.81□□□□□ -1.32
UPF3A-207ENST00000481131 MBNL2Q5VZF2 373 aaKnown RBP6.81□□□□□ -1.32
UPF3A-207ENST00000481131 BCL6BQ8N143 479 aaPredicted RBP6.81□□□□□ -1.32
UPF3A-207ENST00000481131 OR14C36Q8NHC7 312 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 CLIC6Q96NY7 704 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 FDXACB1Q9BRP7 624 aaPredicted RBP6.81□□□□□ -1.32
UPF3A-207ENST00000481131 SOX7Q9BT81 388 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 FAM53CQ9NYF3 392 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms