RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, human

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VLDLR-204	ENST00000478776	FOXN1	O15353	648 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	IGSF3	O75054	1194 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	C6orf222	P0C671	652 aa	Predicted RBP	4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	BMP5	P22003	454 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	STAT3	P40763	770 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	SCNN1G	P51170	649 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	NFE2L2	Q16236	605 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	FOXB2	Q5VYV0	432 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	NOSTRIN	Q8IVI9	506 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	HAS1	Q92839	578 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	MRFAP1L1	Q96HT8	127 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	RPL10L	Q96L21	214 aa	Known RBP	4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	NDOR1	Q9UHB4	597 aa		4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.98	□□□□□ -1.61
VLDLR-204	ENST00000478776	EFCAB14	O75071	495 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	ADCY7	P51828	1080 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	BPIFB4	P59827	614 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	ELAVL1	Q15717	326 aa	Known RBP	4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	FAM111B	Q6SJ93	734 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776		Q6ZRM9	215 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	GAREM2	Q75VX8	874 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	SYNE4	Q8N205	404 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	ANKRD53	Q8N9V6	530 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	E2F7	Q96AV8	911 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	GPR87	Q9BY21	358 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	RCAN3	Q9UKA8	241 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	DENND2A	Q9ULE3	1009 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	COQ6	Q9Y2Z9	468 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	MRPS23	Q9Y3D9	190 aa	Known RBP	4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	B3GALT1	Q9Y5Z6	326 aa		4.97	□□□□□ -1.61
VLDLR-204	ENST00000478776	TRAF5	O00463	557 aa		4.96	□□□□□ -1.62
VLDLR-204	ENST00000478776	SDHA	P31040	664 aa		4.96	□□□□□ -1.62
VLDLR-204	ENST00000478776	SMAD3	P84022	425 aa	Known RBP	4.96	□□□□□ -1.62
VLDLR-204	ENST00000478776	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
VLDLR-204	ENST00000478776	ACAP1	Q15027	740 aa		4.96	□□□□□ -1.62
VLDLR-204	ENST00000478776	KRT40	Q6A162	431 aa		4.96	□□□□□ -1.62
VLDLR-204	ENST00000478776	C2orf69	Q8N8R5	385 aa		4.96	□□□□□ -1.62
VLDLR-204	ENST00000478776	TCF25	Q9BQ70	676 aa		4.96	□□□□□ -1.62
VLDLR-204	ENST00000478776	CELF4	Q9BZC1	486 aa	Known RBP	4.96	□□□□□ -1.62
VLDLR-204	ENST00000478776	UBE2QL1	A1L167	161 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	GOLGA6L6	A8MZA4	724 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	MFAP3L	O75121	409 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	MAF	O75444	373 aa	Predicted RBP	4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	RHOBTB3	O94955	611 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	SLC25A3	Q00325	362 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	ALDH6A1	Q02252	535 aa	Known RBP	4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	LONRF2	Q1L5Z9	754 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	DLG3	Q92796	817 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	EXOC2	Q96KP1	924 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	KANSL2	Q9H9L4	492 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	MAGEL2	Q9UJ55	1249 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	XDH	P47989	1333 aa		4.95	□□□□□ -1.62
VLDLR-204	ENST00000478776	PCSK5	Q92824	1860 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	RASSF10	A6NK89	507 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	FAM20B	O75063	409 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	GC	P02774	474 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	KRT4	P19013	534 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	IRF9	Q00978	393 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	ROM1	Q03395	351 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	TCIRG1	Q13488	830 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	TOB2	Q14106	344 aa	Predicted RBP	4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	DGKD	Q16760	1214 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	TM4SF20	Q53R12	229 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	FKBP15	Q5T1M5	1219 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	MFSD5	Q6N075	450 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	RPUSD2	Q8IZ73	545 aa	Known RBP	4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	JMY	Q8N9B5	988 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	ARL8A	Q96BM9	186 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	FOXB1	Q99853	325 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	SLC52A2	Q9HAB3	445 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	GPRC5B	Q9NZH0	403 aa		4.94	□□□□□ -1.62
VLDLR-204	ENST00000478776	C2orf78	A6NCI8	922 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	DAPK3	O43293	454 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	IPO13	O94829	963 aa	Known RBP	4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	RASGRP1	O95267	797 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	NPTXR	O95502	500 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	NUDT3	O95989	172 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	SLC6A3	Q01959	620 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	GAGE13	Q4V321	117 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	RABL3	Q5HYI8	236 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	CATSPERE	Q5SY80	951 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	PCSK4	Q6UW60	755 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	OVCH1	Q7RTY7	1134 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	BCL6B	Q8N143	479 aa	Predicted RBP	4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	ZNF276	Q8N554	614 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	THAP3	Q8WTV1	239 aa	Predicted RBP	4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	PGBD4	Q96DM1	585 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	GPHA2	Q96T91	129 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	IL23A	Q9NPF7	189 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	NCDN	Q9UBB6	729 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	PTCH2	Q9Y6C5	1203 aa		4.93	□□□□□ -1.62
VLDLR-204	ENST00000478776	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.92	□□□□□ -1.62
VLDLR-204	ENST00000478776	PPFIA4	O75335	1185 aa		4.92	□□□□□ -1.62
VLDLR-204	ENST00000478776	KRT37	O76014	449 aa		4.92	□□□□□ -1.62
VLDLR-204	ENST00000478776	LMO1	P25800	156 aa		4.92	□□□□□ -1.62
VLDLR-204	ENST00000478776	SQSTM1	Q13501	440 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms