RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PPP2R2AP63151 447 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 HPCAP84074 193 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 CAMK2BQ13554 666 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 SPIDRQ14159 915 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 AGBL2Q5U5Z8 902 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 NEPROQ6NW34 567 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 POTEEQ6S8J3 1075 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 PIGWQ7Z7B1 504 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 CRACR2BQ8N4Y2 399 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 RBBP8NLQ8NC74 664 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 HAUS1Q96CS2 278 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 HNRNPABQ99729 332 aaKnown RBP13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 DKK3Q9UBP4 350 aa13.68□□□□□ -0.22
RTFDC1-207ENST00000477573 IGF2BP3O00425 579 aaKnown RBP eCLIP13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 RIMBP2O15034 1052 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 USP17L8P0C7I0 530 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 MYCLP1P12525 358 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 STK38Q15208 465 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 SLC15A2Q16348 729 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 ENDOVQ8N8Q3 282 aaKnown RBP13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 TGFBRAP1Q8WUH2 860 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 PRCCQ92733 491 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 CLIP3Q96DZ5 547 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 RAB3IPQ96QF0 476 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 SYNCQ9H7C4 482 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 MKNK2Q9HBH9 465 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 DMGDHQ9UI17 866 aaKnown RBP13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 CARD8Q9Y2G2 431 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 MROH7Q68CQ1 1323 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 ROBO3Q96MS0 1386 aa13.67□□□□□ -0.22
RTFDC1-207ENST00000477573 GCOM1H8Y6P7 765 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 ATP1A1P05023 1023 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 MYZAPP0CAP1 466 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 RARAP10276 462 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 KCNA2P16389 499 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 GTF2IP78347 998 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 KPNB1Q14974 876 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 GRIK5Q16478 980 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 GSTA3Q16772 222 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 TCERG1LQ5VWI1 586 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 STYK1Q6J9G0 422 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 LONP2Q86WA8 852 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 SCUBE1Q8IWY4 988 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 IFT20Q8IY31 132 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 ASAP3Q8TDY4 903 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 STK32AQ8WU08 396 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 KLHL29Q96CT2 875 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 OLFM3Q96PB7 478 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 RNF26Q9BY78 433 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 KIAA1522Q9P206 1035 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 HSFX1Q9UBD0 423 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 DACH1Q9UI36 760 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 FBXO9Q9UK97 447 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 FADS3Q9Y5Q0 445 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 ITIH6Q6UXX5 1313 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 SMIM22K7EJ46 135 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 MGEA5O60502 916 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 LDHAP00338 332 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 CYP2D6P10635 497 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 SKIP12755 728 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 CPA3P15088 417 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 HOXD10P28358 340 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 HPDP32754 393 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 DUS1LQ6P1R4 473 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 CENPKQ9BS16 269 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 IL1RAPL1Q9NZN1 696 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 ZNF180Q9UJW8 692 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 LUC7L2Q9Y383 392 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 NAV1Q8NEY1 1877 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 GAKO14976 1311 aa13.66□□□□□ -0.22
RTFDC1-207ENST00000477573 KRT16P08779 473 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 SKIV2L2P42285 1042 aaKnown RBP13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 RAD23BP54727 409 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 RBL2Q08999 1139 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 ADRM1Q16186 407 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 TSR1Q2NL82 804 aaKnown RBP13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 GALNTL6Q49A17 601 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 SYDE2Q5VT97 1194 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 DAAM2Q86T65 1068 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 TRIM50Q86XT4 487 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 ZNF444Q8N0Y2 327 aaPredicted RBP13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 LINC00301Q8NCQ3 95 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 GDAP1Q8TB36 358 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 ENOX1Q8TC92 643 aaKnown RBP13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 CAPZA3Q96KX2 299 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 AIFM3Q96NN9 605 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 PLCB1Q9NQ66 1216 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 INTUQ9ULD6 942 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 TJP3O95049 919 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 PRLRP16471 622 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 KCNA3P22001 575 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 CMA1P23946 247 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 COPS2P61201 443 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 C2orf54Q08AI8 447 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 TROAPQ12815 778 aa13.65□□□□□ -0.22
RTFDC1-207ENST00000477573 PDCD4Q53EL6 469 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms