RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 RIN1Q13671 783 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 TKFCQ3LXA3 575 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 ESRP1Q6NXG1 681 aaKnown RBP6.65□□□□□ -1.34
VPS50-213ENST00000477572 CNNM4Q6P4Q7 775 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 KLHDC10Q6PID8 442 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 MAMDC4Q6UXC1 1216 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 SGMS1Q86VZ5 419 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 D2HGDHQ8N465 521 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 RTF1Q92541 710 aaKnown RBP6.65□□□□□ -1.34
VPS50-213ENST00000477572 GCDHQ92947 438 aaPredicted RBP6.65□□□□□ -1.34
VPS50-213ENST00000477572 FAM89AQ96GI7 184 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 C16orf92Q96LL3 132 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 TLR9Q9NR96 1032 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 FANCLQ9NW38 375 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 OXSMQ9NWU1 459 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 SRRDQ9UH36 339 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 DNAI1Q9UI46 699 aa6.65□□□□□ -1.34
VPS50-213ENST00000477572 CTDP1Q9Y5B0 961 aaPredicted RBP6.65□□□□□ -1.34
VPS50-213ENST00000477572 GOLGA8BA8MQT2 603 aa6.64□□□□□ -1.35
VPS50-213ENST00000477572 ZNF891A8MT65 544 aaPredicted RBP6.64□□□□□ -1.35
VPS50-213ENST00000477572 CYP17A1P05093 508 aa6.64□□□□□ -1.35
VPS50-213ENST00000477572 ATP2A2P16615 1042 aaKnown RBP6.64□□□□□ -1.35
VPS50-213ENST00000477572 HIBADHP31937 336 aaKnown RBP6.64□□□□□ -1.35
VPS50-213ENST00000477572 FOXE3Q13461 319 aa6.64□□□□□ -1.35
VPS50-213ENST00000477572 MYBPC3Q14896 1274 aa6.64□□□□□ -1.35
VPS50-213ENST00000477572 DGKDQ16760 1214 aa6.64□□□□□ -1.35
VPS50-213ENST00000477572 CREB3L3Q68CJ9 461 aa6.64□□□□□ -1.35
VPS50-213ENST00000477572 C1orf210Q8IVY1 113 aa6.64□□□□□ -1.35
VPS50-213ENST00000477572 CSRNP2Q9H175 543 aa6.64□□□□□ -1.35
VPS50-213ENST00000477572 POFUT1Q9H488 388 aa6.64□□□□□ -1.35
VPS50-213ENST00000477572 MAGEC2Q9UBF1 373 aaPredicted RBP6.64□□□□□ -1.35
VPS50-213ENST00000477572 HECAQ9UBI9 543 aaPredicted RBP6.64□□□□□ -1.35
VPS50-213ENST00000477572 A0A1W2PRX2 142 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 FZD7O75084 574 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 H2AFYO75367 372 aaKnown RBP6.63□□□□□ -1.35
VPS50-213ENST00000477572 RFPL3O75679 317 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 SLPIP03973 132 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 BPIFB4P59827 614 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 TCEA2Q15560 299 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 IGFL4Q6B9Z1 124 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 UNQ6494/PRO21346Q6UXR6 183 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 HOMER1Q86YM7 354 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 DHX37Q8IY37 1157 aaKnown RBP6.63□□□□□ -1.35
VPS50-213ENST00000477572 ANKRD53Q8N9V6 530 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 DYDC2Q96IM9 177 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 MYL10Q9BUA6 226 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 NELFAQ9H3P2 528 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 IFT57Q9NWB7 429 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 KCMF1Q9P0J7 381 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 ZKSCAN5Q9Y2L8 839 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 VWA7Q9Y334 891 aa6.63□□□□□ -1.35
VPS50-213ENST00000477572 MAFO75444 373 aaPredicted RBP6.62□□□□□ -1.35
VPS50-213ENST00000477572 HNRNPLP14866 589 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS50-213ENST00000477572 ADCY7P51828 1080 aa6.62□□□□□ -1.35
VPS50-213ENST00000477572 TCIRG1Q13488 830 aa6.62□□□□□ -1.35
VPS50-213ENST00000477572 EPHA7Q15375 998 aa6.62□□□□□ -1.35
VPS50-213ENST00000477572 IL17DQ8TAD2 202 aa6.62□□□□□ -1.35
VPS50-213ENST00000477572 CHTF18Q8WVB6 975 aa6.62□□□□□ -1.35
VPS50-213ENST00000477572 GPHA2Q96T91 129 aa6.62□□□□□ -1.35
VPS50-213ENST00000477572 THG1LQ9NWX6 298 aaKnown RBP6.62□□□□□ -1.35
VPS50-213ENST00000477572 ING1Q9UK53 422 aaPredicted RBP6.62□□□□□ -1.35
VPS50-213ENST00000477572 FAM83GA6ND36 823 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 CAPN14A8MX76 684 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 C1SP09871 688 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 ACVRL1P37023 503 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 HHEXQ03014 270 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 ADCY2Q08462 1091 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 PCBP1Q15365 356 aaKnown RBP eCLIP6.61□□□□□ -1.35
VPS50-213ENST00000477572 SPTY2D1Q68D10 685 aaPredicted RBP6.61□□□□□ -1.35
VPS50-213ENST00000477572 GAREM2Q75VX8 874 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 LRRTM3Q86VH5 581 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 C7orf31Q8N865 590 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 APPBP2Q92624 585 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 RABGGTAQ92696 567 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 NKD2Q969F2 451 aaPredicted RBP6.61□□□□□ -1.35
VPS50-213ENST00000477572 GFM2Q969S9 779 aaKnown RBP6.61□□□□□ -1.35
VPS50-213ENST00000477572 ZNF503Q96F45 646 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 WDR92Q96MX6 357 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 SORCS2Q96PQ0 1159 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 MTFR1LQ9H019 292 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 SH3BP1Q9Y3L3 701 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 SPO11Q9Y5K1 396 aa6.61□□□□□ -1.35
VPS50-213ENST00000477572 MRPL42Q9Y6G3 142 aaKnown RBP6.61□□□□□ -1.35
VPS50-213ENST00000477572 GAS7O60861 476 aa6.6□□□□□ -1.35
VPS50-213ENST00000477572 PRPF6O94906 941 aaKnown RBP6.6□□□□□ -1.35
VPS50-213ENST00000477572 SESN2P58004 480 aaPredicted RBP6.6□□□□□ -1.35
VPS50-213ENST00000477572 KLF10Q13118 480 aa6.6□□□□□ -1.35
VPS50-213ENST00000477572 C16orf86Q6ZW13 317 aa6.6□□□□□ -1.35
VPS50-213ENST00000477572 NME9Q86XW9 330 aa6.6□□□□□ -1.35
VPS50-213ENST00000477572 RPGRQ92834 1020 aaKnown RBP6.6□□□□□ -1.35
VPS50-213ENST00000477572 SLC7A6OSQ96CW6 309 aaPredicted RBP6.6□□□□□ -1.35
VPS50-213ENST00000477572 PLEKHG4BQ96PX9 1271 aa6.6□□□□□ -1.35
VPS50-213ENST00000477572 SLC6A15Q9H2J7 730 aa6.6□□□□□ -1.35
VPS50-213ENST00000477572 MTG2Q9H4K7 406 aa6.6□□□□□ -1.35
VPS50-213ENST00000477572 ZMAT4Q9H898 229 aa6.6□□□□□ -1.35
VPS50-213ENST00000477572 INTS7Q9NVH2 962 aaKnown RBP6.6□□□□□ -1.35
VPS50-213ENST00000477572 POLR3BQ9NW08 1133 aaPredicted RBP6.6□□□□□ -1.35
VPS50-213ENST00000477572 NCDNQ9UBB6 729 aa6.6□□□□□ -1.35
VPS50-213ENST00000477572 UBE2QL1A1L167 161 aa6.59□□□□□ -1.35
VPS50-213ENST00000477572 LCHNA4D1U4 455 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms