RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 SYT2Q8N9I0 419 aaPredicted RBP22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 MSANTD4Q8NCY6 345 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 RDM1Q8NG50 284 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 NEK9Q8TD19 979 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 SEPT1Q8WYJ6 367 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 DDX12PQ92771 950 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 EXOC4Q96A65 974 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 RAB21Q9UL25 225 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 IGKV6D-21A0A0A0MT36 114 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 MAP2K7O14733 419 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 CYP11B2P19099 503 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 HNRNPH2P55795 449 aaKnown RBP22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 TNFAIP2Q03169 654 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 LONRF2Q1L5Z9 754 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 PLA2G4FQ68DD2 849 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 IQSEC1Q6DN90 963 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 NACC1Q96RE7 527 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 C7orf25Q9BPX7 421 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 MYO1AQ9UBC5 1043 aa22.88■■□□□ 1.25
SMIM11A-204ENST00000474455 NOP56O00567 594 aaKnown RBP22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 MFAP3LO75121 409 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 ERLIN1O75477 346 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 NPEPPSP55786 919 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 SLC20A2Q08357 652 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 PTPN21Q16825 1174 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 ANO5Q75V66 913 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 GPBP1Q86WP2 473 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 C4orf19Q8IY42 314 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 AFG1LQ8WV93 481 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 DESI2Q9BSY9 194 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 RUSC1Q9BVN2 902 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 MAGEF1Q9HAY2 307 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 ZNF302Q9NR11 478 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 WBP1LQ9NX94 342 aa22.87■■□□□ 1.25
SMIM11A-204ENST00000474455 GH1P01241 217 aa22.86■■□□□ 1.25
SMIM11A-204ENST00000474455 RPN1P04843 607 aaKnown RBP22.86■■□□□ 1.25
SMIM11A-204ENST00000474455 YWHABP31946 246 aaKnown RBP22.86■■□□□ 1.25
SMIM11A-204ENST00000474455 HSP90AA4PQ58FG1 418 aa22.86■■□□□ 1.25
SMIM11A-204ENST00000474455 HPS3Q969F9 1004 aa22.86■■□□□ 1.25
SMIM11A-204ENST00000474455 DNAJC19Q96DA6 116 aa22.86■■□□□ 1.25
SMIM11A-204ENST00000474455 BEGAINQ9BUH8 593 aa22.86■■□□□ 1.25
SMIM11A-204ENST00000474455 GNEQ9Y223 722 aaKnown RBP22.86■■□□□ 1.25
SMIM11A-204ENST00000474455 MAFBQ9Y5Q3 323 aaPredicted RBP22.86■■□□□ 1.25
SMIM11A-204ENST00000474455 IGSF9BQ9UPX0 1349 aa22.86■■□□□ 1.25
SMIM11A-204ENST00000474455 MUTP22033 750 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 RBL2Q08999 1139 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 TRIM14Q14142 442 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 RINT1Q6NUQ1 792 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 RAD9BQ6WBX8 426 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 TMTC1Q8IUR5 882 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 GBP3Q9H0R5 595 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 BMP2KQ9NSY1 1161 aaPredicted RBP22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 EVPLQ92817 2033 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 KAT6AQ92794 2004 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 SOWAHDA6NJG2 315 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 DYNC1LI2O43237 492 aaPredicted RBP22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 ASIC1P78348 528 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 PRKCEQ02156 737 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 SPAG1Q07617 926 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 CACNB2Q08289 660 aaPredicted RBP22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 LAMC2Q13753 1193 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 HDXQ7Z353 690 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 SMYD4Q8IYR2 804 aaPredicted RBP22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 OR6J1Q8NGC5 347 aa22.85■■□□□ 1.25
SMIM11A-204ENST00000474455 CTAGE9A4FU28 777 aa22.84■■□□□ 1.25
SMIM11A-204ENST00000474455 LYPLA2O95372 231 aa22.84■■□□□ 1.25
SMIM11A-204ENST00000474455 CYBAP13498 195 aa22.84■■□□□ 1.25
SMIM11A-204ENST00000474455 MARK3P27448 753 aa22.84■■□□□ 1.25
SMIM11A-204ENST00000474455 RARRES1P49788 294 aa22.84■■□□□ 1.25
SMIM11A-204ENST00000474455 STAT5BP51692 787 aa22.84■■□□□ 1.25
SMIM11A-204ENST00000474455 AMPD3Q01432 767 aa22.84■■□□□ 1.25
SMIM11A-204ENST00000474455 WHAMMP3Q1A5X7 153 aa22.84■■□□□ 1.25
SMIM11A-204ENST00000474455 EPC1Q9H2F5 836 aa22.84■■□□□ 1.25
SMIM11A-204ENST00000474455 RSPH10B2B2RC85 870 aa22.83■■□□□ 1.25
SMIM11A-204ENST00000474455 ADCY3O60266 1144 aa22.83■■□□□ 1.25
SMIM11A-204ENST00000474455 RSPH10BP0C881 870 aa22.83■■□□□ 1.25
SMIM11A-204ENST00000474455 HOXD10P28358 340 aa22.83■■□□□ 1.25
SMIM11A-204ENST00000474455 MTF1Q14872 753 aa22.83■■□□□ 1.25
SMIM11A-204ENST00000474455 MFSD14CQ5VZR4 134 aa22.83■■□□□ 1.25
SMIM11A-204ENST00000474455 C1orf186Q6ZWK4 172 aa22.83■■□□□ 1.25
SMIM11A-204ENST00000474455 ATP6V0A1Q93050 837 aa22.83■■□□□ 1.25
SMIM11A-204ENST00000474455 LIMA1Q9UHB6 759 aaKnown RBP22.83■■□□□ 1.25
SMIM11A-204ENST00000474455 TEX33O43247 280 aa22.83■■□□□ 1.24
SMIM11A-204ENST00000474455 CCND3P30281 292 aaPredicted RBP22.83■■□□□ 1.24
SMIM11A-204ENST00000474455 IRF5Q13568 498 aa22.83■■□□□ 1.24
SMIM11A-204ENST00000474455 RAET1EQ8TD07 263 aa22.83■■□□□ 1.24
SMIM11A-204ENST00000474455 EMID1Q96A84 441 aaPredicted RBP22.83■■□□□ 1.24
SMIM11A-204ENST00000474455 CWC15Q9P013 229 aaKnown RBP22.83■■□□□ 1.24
SMIM11A-204ENST00000474455 SFI1A8K8P3 1242 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 PPP1R3GB7ZBB8 358 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 LGR5O75473 907 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 IDEP14735 1019 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 CNGA1P29973 690 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 GIT2Q14161 759 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 XKR9Q5GH70 373 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 MAEAQ7L5Y9 396 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 PPTC7Q8NI37 304 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 GLG1Q92896 1179 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 REEP2Q9BRK0 252 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 GDAQ9Y2T3 454 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms