RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 HES6Q96HZ4 224 aa11.92□□□□□ -0.5
C9orf3-214ENST00000473778 GMCL1Q96IK5 515 aa11.92□□□□□ -0.5
C9orf3-214ENST00000473778 DYDC2Q96IM9 177 aa11.92□□□□□ -0.5
C9orf3-214ENST00000473778 POLR3CQ9BUI4 534 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-214ENST00000473778 BCCIPQ9P287 314 aaKnown RBP eCLIP11.92□□□□□ -0.5
C9orf3-214ENST00000473778 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-214ENST00000473778 PRR12Q9ULL5 1215 aa11.92□□□□□ -0.5
C9orf3-214ENST00000473778 DCDC2CA8MYV0 355 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 NDUFAB1O14561 156 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-214ENST00000473778 TBCAO75347 108 aaKnown RBP11.91□□□□□ -0.5
C9orf3-214ENST00000473778 H2AFZP0C0S5 128 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 POU5F1Q01860 360 aaKnown RBP11.91□□□□□ -0.5
C9orf3-214ENST00000473778 ZNF844Q08AG5 666 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 ABCB5Q2M3G0 1257 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 DACT2Q5SW24 774 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 H2AFVQ71UI9 128 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 MAATS1Q7Z4T9 603 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 ARHGEF26Q96DR7 871 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 PBKQ96KB5 322 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 TMBIM4Q9HC24 238 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 KRIT1O00522 736 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 PSMD10O75832 226 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 TRIM37O94972 964 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 CYP3A4P08684 503 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 BMP3P12645 472 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 ABCB4P21439 1286 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 HPDP32754 393 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-214ENST00000473778 FMO5P49326 533 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 DRAP1Q14919 205 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-214ENST00000473778 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 NAA35Q5VZE5 725 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 EP400NLQ6ZTU2 488 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 FAM186BQ8IYM0 893 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 MYCT1Q8N699 235 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 SLC35G2Q8TBE7 412 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 TDRD3Q9H7E2 651 aaKnown RBP11.91□□□□□ -0.5
C9orf3-214ENST00000473778 METTL14Q9HCE5 456 aaKnown RBP11.91□□□□□ -0.5
C9orf3-214ENST00000473778 COG5Q9UP83 839 aa11.91□□□□□ -0.5
C9orf3-214ENST00000473778 FRMPD4Q14CM0 1322 aa11.9□□□□□ -0.5
C9orf3-214ENST00000473778 GTPBP10A4D1E9 387 aaKnown RBP11.9□□□□□ -0.5
C9orf3-214ENST00000473778 TISP43B9A030 160 aa11.9□□□□□ -0.5
C9orf3-214ENST00000473778 MYO1FO00160 1098 aa11.9□□□□□ -0.5
C9orf3-214ENST00000473778 CPP00450 1065 aa11.9□□□□□ -0.5
C9orf3-214ENST00000473778 NPR1P16066 1061 aa11.9□□□□□ -0.5
C9orf3-214ENST00000473778 SOX5P35711 763 aa11.9□□□□□ -0.5
C9orf3-214ENST00000473778 CCDC91Q7Z6B0 441 aa11.9□□□□□ -0.5
C9orf3-214ENST00000473778 PPM1EQ8WY54 764 aa11.9□□□□□ -0.5
C9orf3-214ENST00000473778 CALR3Q96L12 384 aaKnown RBP11.9□□□□□ -0.5
C9orf3-214ENST00000473778 TRIM51Q9BSJ1 452 aa11.9□□□□□ -0.5
C9orf3-214ENST00000473778 ERVK-5Q9HDB9 667 aa11.9□□□□□ -0.5
C9orf3-214ENST00000473778 SUCLA2Q9P2R7 463 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-214ENST00000473778 A0A0A6YYK5 440 aaPredicted RBP11.9□□□□□ -0.51
C9orf3-214ENST00000473778 SHTN1A0MZ66 631 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 G3V3G9 751 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 DDX3YO15523 660 aaKnown RBP11.9□□□□□ -0.51
C9orf3-214ENST00000473778 PPP1R37O75864 691 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 CFBP00751 764 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 FOSP01100 380 aaPredicted RBP11.9□□□□□ -0.51
C9orf3-214ENST00000473778 RPL13P26373 211 aaKnown RBP11.9□□□□□ -0.51
C9orf3-214ENST00000473778 ZNF76P36508 570 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 MDH1P40925 334 aaKnown RBP11.9□□□□□ -0.51
C9orf3-214ENST00000473778 CYP2J2P51589 502 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 PPATQ06203 517 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 SLC15A2Q16348 729 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 PTGISQ16647 500 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 CHADLQ6NUI6 762 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 AADACL2Q6P093 401 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 BTNL9Q6UXG8 535 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 ZNF720Q7Z2F6 126 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 PODNQ7Z5L7 613 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 ADAT2Q7Z6V5 191 aaKnown RBP11.9□□□□□ -0.51
C9orf3-214ENST00000473778 ACER1Q8TDN7 264 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 EPN3Q9H201 632 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 CENPHQ9H3R5 247 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 DNAJC12Q9UKB3 198 aa11.9□□□□□ -0.51
C9orf3-214ENST00000473778 A0A087WUV0 522 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 CLSTN1O94985 981 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 FAM13AO94988 1023 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 FGGP02679 453 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 PSMC2P35998 433 aaKnown RBP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 DLG4P78352 724 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 HDLBPQ00341 1268 aaKnown RBP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 LRCH2Q5VUJ6 765 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 PHLDB3Q6NSJ2 640 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 MICALL1Q8N3F8 863 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 RDH13Q8NBN7 331 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 ZSWIM2Q8NEG5 633 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 ATP8B4Q8TF62 1192 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 SEC14L1Q92503 715 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 THAP2Q9H0W7 228 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 CNOT8Q9UFF9 292 aaKnown RBP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 CHORDC1Q9UHD1 332 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 SLC12A6Q9UHW9 1150 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 EIF3DO15371 548 aaKnown RBP eCLIP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 ECE2O60344 883 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms