RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 PRMT7Q9NVM4 692 aaPredicted RBP11.96□□□□□ -0.5
NPHP3-203ENST00000465756 PCDHB12Q9Y5F1 795 aa11.96□□□□□ -0.5
NPHP3-203ENST00000465756 CLCN3P51790 818 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 AAK1Q2M2I8 961 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 SLC24A5Q71RS6 500 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 CABP7Q86V35 215 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 FBXO22Q8NEZ5 403 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 KCNG4Q8TDN1 519 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 MTMR9Q96QG7 549 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 ELAC1Q9H777 363 aaKnown RBP11.95□□□□□ -0.5
NPHP3-203ENST00000465756 FAM50BQ9Y247 325 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 USO1O60763 962 aaKnown RBP11.95□□□□□ -0.5
NPHP3-203ENST00000465756 FOSL2P15408 326 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 PPM1AP35813 382 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 ATP2C1P98194 919 aaPredicted RBP11.95□□□□□ -0.5
NPHP3-203ENST00000465756 STRN3Q13033 797 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 NAALADL2Q58DX5 795 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 GLB1LQ6UWU2 654 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 KIAA0319LQ8IZA0 1049 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 LARSQ9P2J5 1176 aaKnown RBP11.95□□□□□ -0.5
NPHP3-203ENST00000465756 KANSL3Q9P2N6 904 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 UMODL1Q5DID0 1318 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 EYA4O95677 639 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 IBSPP21815 317 aaPredicted RBP11.95□□□□□ -0.5
NPHP3-203ENST00000465756 SARSP49591 514 aaKnown RBP11.95□□□□□ -0.5
NPHP3-203ENST00000465756 DMP1Q13316 513 aaPredicted RBP11.95□□□□□ -0.5
NPHP3-203ENST00000465756 FAM102BQ5T8I3 360 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 CMTR2Q8IYT2 770 aaKnown RBP11.95□□□□□ -0.5
NPHP3-203ENST00000465756 KRI1Q8N9T8 703 aaKnown RBP11.95□□□□□ -0.5
NPHP3-203ENST00000465756 C11orf84Q9BUA3 381 aaPredicted RBP11.95□□□□□ -0.5
NPHP3-203ENST00000465756 GJB4Q9NTQ9 266 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 STK17AQ9UEE5 414 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 PADI3Q9ULW8 664 aa11.95□□□□□ -0.5
NPHP3-203ENST00000465756 INO80B-WBP1J3KQ70 363 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 N4BP3O15049 544 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 NCK2O43639 380 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 FAM13AO94988 1023 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 DARSP14868 501 aaKnown RBP11.94□□□□□ -0.5
NPHP3-203ENST00000465756 TIGD5Q53EQ6 642 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 RUFY4Q6ZNE9 571 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 TRAPPC12Q8WVT3 735 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 HAS1Q92839 578 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 NKX2-4Q9H2Z4 354 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 ZNF576Q9H609 170 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 VWA3AA6NCI4 1184 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 LRRIQ4A6NIV6 560 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 NCLP19338 710 aaKnown RBP11.94□□□□□ -0.5
NPHP3-203ENST00000465756 CD52P31358 61 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 LPIN1Q14693 890 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 KIZQ2M2Z5 673 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 RASIP1Q5U651 963 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 PADI6Q6TGC4 694 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 OSMRQ99650 979 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 UPP2O95045 317 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 LAG3P18627 525 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 CYP11B2P19099 503 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 SYT1P21579 422 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 KRT85P78386 507 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 MAPK6Q16659 721 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 KYAT1Q16773 422 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 NOTUMQ6P988 496 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 LRRC71Q8N4P6 559 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 PRIMPOLQ96LW4 560 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 TMEM161AQ9NX61 479 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 CNTNAP2Q9UHC6 1331 aa11.94□□□□□ -0.5
NPHP3-203ENST00000465756 GJB5O95377 273 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 YEATS4O95619 227 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 EOMESO95936 686 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 GPC3P51654 580 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 RPS6KC1Q96S38 1066 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 POLR3FQ9H1D9 316 aaPredicted RBP11.93□□□□□ -0.5
NPHP3-203ENST00000465756 PCDH10Q9P2E7 1040 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 NBNO60934 754 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 FXR1P51114 621 aaKnown RBP eCLIP11.93□□□□□ -0.5
NPHP3-203ENST00000465756 KRT17Q04695 432 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 TMEM62Q0P6H9 643 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 B3GNT9Q6UX72 402 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 ADAM2Q99965 735 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 PLVAPQ9BX97 442 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 TMEM117Q9H0C3 514 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 CUEDC2Q9H467 287 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 BCAS3Q9H6U6 928 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 MAGEF1Q9HAY2 307 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 FOXD4L1Q9NU39 408 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 RGL1Q9NZL6 768 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 LMCD1Q9NZU5 365 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 HOOK1Q9UJC3 728 aaKnown RBP11.93□□□□□ -0.5
NPHP3-203ENST00000465756 ST3GAL5Q9UNP4 418 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 KIAA1024Q9UPX6 916 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 PIN4Q9Y237 131 aaKnown RBP11.93□□□□□ -0.5
NPHP3-203ENST00000465756 VTNP04004 478 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 TARBP2Q15633 366 aaKnown RBP11.93□□□□□ -0.5
NPHP3-203ENST00000465756 FAM117BQ6P1L5 589 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 FERMT3Q86UX7 667 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 RNF149Q8NC42 400 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 DHX33Q9H6R0 707 aaKnown RBP11.93□□□□□ -0.5
NPHP3-203ENST00000465756 ERVK-5Q9HDB9 667 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 EXOC7Q9UPT5 735 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 ALPK3Q96L96 1907 aa11.93□□□□□ -0.5
NPHP3-203ENST00000465756 POTEMA6NI47 508 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms