RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 LMAN2LQ9H0V9 348 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 ADAMTS10Q9H324 1103 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 TTC12Q9H892 705 aaPredicted RBP14.66□□□□□ -0.06
HDAC1-203ENST00000463172 CDHR5Q9HBB8 845 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 ATP6V0A4Q9HBG4 840 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 AAASQ9NRG9 546 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 DACT1Q9NYF0 836 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 SUCLA2Q9P2R7 463 aaPredicted RBP14.66□□□□□ -0.06
HDAC1-203ENST00000463172 FAM205CA6NFA0 338 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 LPXNO60711 386 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 DARSP14868 501 aaKnown RBP14.65□□□□□ -0.06
HDAC1-203ENST00000463172 ATP2B1P20020 1258 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 IBSPP21815 317 aaPredicted RBP14.65□□□□□ -0.06
HDAC1-203ENST00000463172 YWHABP31946 246 aaKnown RBP14.65□□□□□ -0.06
HDAC1-203ENST00000463172 BMPR1AP36894 532 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 TXKP42681 527 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 TRAPPC10P48553 1259 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 ST3GAL1Q11201 340 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 NAALADL2Q58DX5 795 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 SPOUT1Q5T280 376 aaKnown RBP14.65□□□□□ -0.06
HDAC1-203ENST00000463172 ANO5Q75V66 913 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 RTN4RL1Q86UN2 441 aaPredicted RBP14.65□□□□□ -0.06
HDAC1-203ENST00000463172 TPH2Q8IWU9 490 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 ERMNQ8TAM6 284 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 TMEM40Q8WWA1 233 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 LINC01599Q8WXQ3 324 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 CLP1Q92989 425 aaKnown RBP14.65□□□□□ -0.06
HDAC1-203ENST00000463172 MRPL38Q96DV4 380 aaKnown RBP14.65□□□□□ -0.06
HDAC1-203ENST00000463172 TMX1Q9H3N1 280 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 ELAC1Q9H777 363 aaKnown RBP14.65□□□□□ -0.06
HDAC1-203ENST00000463172 TMEM161AQ9NX61 479 aa14.65□□□□□ -0.06
HDAC1-203ENST00000463172 IGKV6-21A0A0C4DH24 114 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 C5orf67F2Z3F1 127 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 ASAP2O43150 1006 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 STBD1O95210 358 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 SKIP12755 728 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 MCM7P33993 719 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 XKR9Q5GH70 373 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 PLA2G4FQ68DD2 849 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 SPRED2Q7Z698 418 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 RHPN2Q8IUC4 686 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 NOSTRINQ8IVI9 506 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 ABI1Q8IZP0 508 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 PSPC1Q8WXF1 523 aaKnown RBP14.64□□□□□ -0.07
HDAC1-203ENST00000463172 RSPH1Q8WYR4 309 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 HLA-CQ95604 372 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 PPP2R3CQ969Q6 453 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 DYDC2Q96IM9 177 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 ASB2Q96Q27 587 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 EIF2AK1Q9BQI3 630 aaKnown RBP14.64□□□□□ -0.07
HDAC1-203ENST00000463172 RC3H2Q9HBD1 1191 aaKnown RBP14.64□□□□□ -0.07
HDAC1-203ENST00000463172 CHST12Q9NRB3 414 aa14.64□□□□□ -0.07
HDAC1-203ENST00000463172 C9IYK1 514 aa14.63□□□□□ -0.07
HDAC1-203ENST00000463172 CYP4A11Q02928 519 aa14.63□□□□□ -0.07
HDAC1-203ENST00000463172 SPIRE1Q08AE8 756 aa14.63□□□□□ -0.07
HDAC1-203ENST00000463172 CTTNQ14247 550 aaKnown RBP14.63□□□□□ -0.07
HDAC1-203ENST00000463172 CSPP1Q1MSJ5 1256 aa14.63□□□□□ -0.07
HDAC1-203ENST00000463172 P2RX5Q93086 422 aa14.63□□□□□ -0.07
HDAC1-203ENST00000463172 RAB34Q9BZG1 259 aa14.63□□□□□ -0.07
HDAC1-203ENST00000463172 ANKEF1Q9NU02 776 aa14.63□□□□□ -0.07
HDAC1-203ENST00000463172 PCDHB12Q9Y5F1 795 aa14.63□□□□□ -0.07
HDAC1-203ENST00000463172 STK24Q9Y6E0 443 aa14.63□□□□□ -0.07
HDAC1-203ENST00000463172 NCOR1O75376 2440 aa14.63□□□□□ -0.07
HDAC1-203ENST00000463172 ARID2Q68CP9 1835 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 A0A087WZ62 844 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 TMEM150BA6NC51 233 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 TBKBP1A7MCY6 615 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 NCK2O43639 380 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 SLITRK3O94933 977 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 LYPLA2O95372 231 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 OR52Z1P0C646 297 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 NPEPPSP55786 919 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 FAM189BP81408 668 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 NCBP1Q09161 790 aaKnown RBP14.62□□□□□ -0.07
HDAC1-203ENST00000463172 FNDC1Q4ZHG4 1894 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-203ENST00000463172 PAN2Q504Q3 1202 aaKnown RBP14.62□□□□□ -0.07
HDAC1-203ENST00000463172 TTC38Q5R3I4 469 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 TTC28Q96AY4 2481 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 NLRP4Q96MN2 994 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 MTMR9Q96QG7 549 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 CEP89Q96ST8 783 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 MTRQ99707 1265 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 SH2D3AQ9BRG2 576 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 FDXACB1Q9BRP7 624 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-203ENST00000463172 COL25A1Q9BXS0 654 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-203ENST00000463172 DHX33Q9H6R0 707 aaKnown RBP14.62□□□□□ -0.07
HDAC1-203ENST00000463172 PRDM6Q9NQX0 595 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 RGL1Q9NZL6 768 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-203ENST00000463172 COL4A3BPQ9Y5P4 624 aa14.62□□□□□ -0.07
HDAC1-203ENST00000463172 CARNS1A5YM72 827 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 H3BQV1 296 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 MGEA5O60502 916 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 DGAT1O75907 488 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 EOMESO95936 686 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 XRCC6P12956 609 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDAC1-203ENST00000463172 TFDP1Q14186 410 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 DSC3Q14574 896 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 MXD4Q14582 209 aaPredicted RBP14.61□□□□□ -0.07
HDAC1-203ENST00000463172 EMC2Q15006 297 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms