RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PLEKHN1Q494U1 663 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 DALRD3Q5D0E6 543 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 SUSD4Q5VX71 490 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 CWF19L1Q69YN2 538 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 KIF6Q6ZMV9 814 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 C16orf71Q8IYS4 520 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 LRRC47Q8N1G4 583 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 PI4KAP1Q8N8J0 262 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 ZBTB38Q8NAP3 1195 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 STK31Q9BXU1 1019 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 HYPKQ9NX55 129 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 NOB1Q9ULX3 412 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 NIP7Q9Y221 180 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 FHOD1Q9Y613 1164 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 ABCC12Q96J65 1359 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 TAF1P21675 1872 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 A0A087WZG4 1122 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 A0A0G2JLW4 131 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 FGF10O15520 208 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 ADCY3O60266 1144 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 BUB1BO60566 1050 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 IGKV5-2P06315 115 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 RGS19P49795 217 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 CORO7P57737 925 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 FSTL1Q12841 308 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 ZC3H12BQ5HYM0 836 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 PRR5LQ6MZQ0 368 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 ZC3H14Q6PJT7 736 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 SLC4A10Q6U841 1118 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 NLRP10Q86W26 655 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 PPFIBP1Q86W92 1011 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 ZNF34Q8IZ26 560 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 NAT16Q8N8M0 369 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 FRAT1Q92837 279 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 PWWP2AQ96N64 755 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 GP6Q9HCN6 339 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 JAG2Q9Y219 1238 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 CD2APQ9Y5K6 639 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 COL4A1P02462 1669 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 TNRC6CQ9HCJ0 1690 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 N4BP2Q86UW6 1770 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 ANKRD31Q8N7Z5 1873 aa5.88□□□□□ -1.47
ATPAF1-203ENST00000460928 CCDC163A0A0D9SF12 145 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 H0Y8X5 98 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 AGRPO00253 132 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 CYBBP04839 570 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 GSTM1P09488 218 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 MSL3P1P0C860 447 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 DPEP1P16444 411 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 NOP2P46087 812 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 ZNF445P59923 1031 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 TCIRG1Q13488 830 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 HSP90AA2PQ14568 343 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 C21orf62-AS1Q17RA5 79 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 SV2CQ496J9 727 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 C20orf194Q5TEA3 1177 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 PAQR3Q6TCH7 311 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 OLFM4Q6UX06 510 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 KSR2Q6VAB6 950 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 NBPF5PQ86XG9 351 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 TEX2Q8IWB9 1127 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 PLBD2Q8NHP8 589 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 FAM89AQ96GI7 184 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 SGSM3Q96HU1 749 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 TEPSINQ96N21 525 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 ISCA1Q9BUE6 129 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 METTL14Q9HCE5 456 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 NMRK2Q9NPI5 230 aa5.87□□□□□ -1.47
ATPAF1-203ENST00000460928 ANKRD36CQ5JPF3 1778 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 ZC3H12DA2A288 527 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 ERVV-1B6SEH8 477 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 FOXN1O15353 648 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 MARCH6O60337 910 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 NTSR2O95665 410 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 TP53P04637 393 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 DBHP09172 617 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 PFKLP17858 780 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 ZNF143P52747 638 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 IRX6P78412 446 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 TARBP2Q15633 366 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 VMACQ2NL98 169 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 EPHA10Q5JZY3 1008 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 AXDND1Q5T1B0 1012 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 TDRD10Q5VZ19 366 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 DCAF15Q66K64 600 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 JAMLQ86YT9 394 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 RPUSD2Q8IZ73 545 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 TP53I13Q8NBR0 393 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 FEZF2Q8TBJ5 459 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 DNAAF4Q8WXU2 420 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 APBA2Q99767 749 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 PDLIM7Q9NR12 457 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 FAM86C1Q9NVL1 165 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 TRMT112Q9UI30 125 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 NAP1L2Q9ULW6 460 aaPredicted RBP5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 PLAAQ9Y263 795 aa5.86□□□□□ -1.47
ATPAF1-203ENST00000460928 COL11A2P13942 1736 aaPredicted RBP5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 KIAA1551Q9HCM1 1747 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 A0A1W2PQ27 194 aa5.85□□□□□ -1.47
ATPAF1-203ENST00000460928 A0A1W2PQ64 194 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms