RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 NCBP1Q09161 790 aaKnown RBP13.66□□□□□ -0.22
HDAC4-206ENST00000460235 PCBP1Q15365 356 aaKnown RBP eCLIP13.66□□□□□ -0.22
HDAC4-206ENST00000460235 COL13A1Q5TAT6 717 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-206ENST00000460235 UNC13DQ70J99 1090 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 ANKRD33Q7Z3H0 272 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 SH3RF1Q7Z6J0 888 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 SERINC5Q86VE9 423 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 ZNF410Q86VK4 478 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 MYCT1Q8N699 235 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 SCLT1Q96NL6 688 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 C2orf40Q9H1Z8 148 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 PANK4Q9NVE7 773 aa13.66□□□□□ -0.22
HDAC4-206ENST00000460235 SCN10AQ9Y5Y9 1956 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 MYMKA6NI61 221 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 CCDC85CA6NKD9 419 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 ZBTB42B2RXF5 422 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 HIP1RO75146 1068 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 PLS3P13797 630 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 NAMPTP43490 491 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 PHKA2P46019 1235 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 ADAM17P78536 824 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 STIM1Q13586 685 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 GIT2Q14161 759 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 HSP90AA2PQ14568 343 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-206ENST00000460235 KCNB1Q14721 858 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 SNX17Q15036 470 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 HERC4Q5GLZ8 1057 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-206ENST00000460235 GDF6Q6KF10 455 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-206ENST00000460235 DYMQ7RTS9 669 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 ZBTB8OSQ8IWT0 167 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 TRIML1Q8N9V2 468 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 SPIRE2Q8WWL2 714 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 REEP2Q9BRK0 252 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 RUSC1Q9BVN2 902 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 POLR3FQ9H1D9 316 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-206ENST00000460235 PDLIM7Q9NR12 457 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 PRKAG2Q9UGJ0 569 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 PCDHB13Q9Y5F0 798 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 PCNTO95613 3336 aa13.65□□□□□ -0.22
HDAC4-206ENST00000460235 KIAA0100Q14667 2235 aaKnown RBP13.64□□□□□ -0.23
HDAC4-206ENST00000460235 A0A087WWV3 80 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 TREHO43280 583 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
HDAC4-206ENST00000460235 EN2P19622 333 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-206ENST00000460235 ARL2P36404 184 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 MARCH8Q5T0T0 291 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 APBB1IPQ7Z5R6 666 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-206ENST00000460235 FAM178BQ8IXR5 827 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 USP38Q8NB14 1042 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 DEPTORQ8TB45 409 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 GPT2Q8TD30 523 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 CEP89Q96ST8 783 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 GCOM2Q9BZD3 368 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-206ENST00000460235 KMT5AQ9NQR1 393 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 OLFML3Q9NRN5 406 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 DACH1Q9UI36 760 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 EXOC7Q9UPT5 735 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 FRMPD3Q5JV73 1810 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
HDAC4-206ENST00000460235 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-206ENST00000460235 TMEM150BA6NC51 233 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 CCDC169A6NNP5 214 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 PQBP1O60828 265 aaKnown RBP13.63□□□□□ -0.23
HDAC4-206ENST00000460235 ZNF131P52739 623 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 ATN1P54259 1190 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-206ENST00000460235 LAMTOR4Q0VGL1 99 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 DPYDQ12882 1025 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 STRN3Q13033 797 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 ARSHQ5FYA8 562 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 SASS6Q6UVJ0 657 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 MAEAQ7L5Y9 396 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 SRGAP1Q7Z6B7 1085 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 RHPN2Q8IUC4 686 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 FAM126BQ8IXS8 530 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 KIAA0319LQ8IZA0 1049 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 PRPF31Q8WWY3 499 aaKnown RBP13.63□□□□□ -0.23
HDAC4-206ENST00000460235 NLRP7Q8WX94 980 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 STAMQ92783 540 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 TMEM143Q96AN5 459 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 HVCN1Q96D96 273 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 SH2D3AQ9BRG2 576 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 NTPCRQ9BSD7 190 aaKnown RBP13.63□□□□□ -0.23
HDAC4-206ENST00000460235 NFKBIZQ9BYH8 718 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 FAM49AQ9H0Q0 323 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-206ENST00000460235 MRPL44Q9H9J2 332 aaKnown RBP13.63□□□□□ -0.23
HDAC4-206ENST00000460235 ATP11BQ9Y2G3 1177 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 SQORQ9Y6N5 450 aa13.63□□□□□ -0.23
HDAC4-206ENST00000460235 FRMD3A2A2Y4 597 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 LRRIQ4A6NIV6 560 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 B4GALT4O60513 344 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 THPOP40225 353 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-206ENST00000460235 CLCN3P51790 818 aa13.62□□□□□ -0.23
HDAC4-206ENST00000460235 CRYBB1P53674 252 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-206ENST00000460235 PEX3P56589 373 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms